CX291435

Overview
NameCX291435
Unique NameCX291435
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8365 contig Ccv1_Contig8365:357..1074. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 462.225 bits (1188), Expect = 1.212e-129
Identity = 210/234 (89.74%), Postives = 224/234 (95.73%), Query Frame = 3
Query:    6 RTLIRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFG 707
            RT+IR+SPG+YRQPVYVPK KN IT AG+ PE TVLTWNNTA+KIEHHQA+RVIGTGTFGCGSVIVEGEDF+AENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLH+GKQYLKDCYIEGSVDFIFGNSTAL+EHCHIHCKSQGFITAQSRKSSQE+TGYVFLRCVITGNG +GY+YLGRPWGPFGRVV A+TYMD CIR+VGWHNWG  ENERSACFYEYRCFG
Sbjct:   34 RTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSSQESTGYVFLRCVITGNGQSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFG 267          
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.368e-56
Identity = 113/241 (46.89%), Postives = 148/241 (61.41%), Query Frame = 3
Query:    6 RTLIRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEG-----SGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ--GFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFG 707
            R +I++  GVY++ V +P  K  IT+ G   E T + W +TA   +    ++    GT+   S  V    FVA+NITF N+ P         QAVA+RV+AD  AF+ CR LG QDTLY H G+ Y KDCYIEGSVDFIFGN+ +L E CH+H  +   G +TAQ R S  E TG+ F++C +T   GTG +YLGR WGPF RVVFA+TYMD  I   GW+NWG    E +  + +Y+C G
Sbjct:  113 RVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPD----SKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLGAVTAQGRSSVLEDTGFSFVKCKVT---GTGVLYLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTG 346          
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 3.735e-46
Identity = 103/250 (41.20%), Postives = 137/250 (54.80%), Query Frame = 3
Query:    3 RRTLIRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAP-----EGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKS----------QGFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFG 707
            RR +I I+ G+Y + V +PKTK  ITL G   + T + WN+TA              GTF C +V V G  FVA+NI+F N AP     +   QAVAIR+  D  AF  C F G QDTL+   G+ Y KDCYI+GS+DFIFGN+ +L + C I   +           G +TA  R S  E +G+ F+ C I   GGTG+++LGR W P+ RVVF  T M   I   GW+N+     + +  + EY C G
Sbjct:  117 RRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYS----------ANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTI---GGTGHVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSG 353          
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.394e-45
Identity = 96/243 (39.51%), Postives = 141/243 (58.02%), Query Frame = 3
Query:    6 RTLIRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGS-----GQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ----GFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFG 707
            +TLI I  G+YR+   V + KN + + G+    T + WNNT               GTF   SV V GE F A NI+F+N+AP  +      QAVA++V  D+ AFY C F G QDTL    G+ + K C+IEGS+DFIFGN  +L E C +H  ++    G ITA  + + ++ TG+VF+ C IT   G+  ++LGR W P+ RV+F+ TYM + +   GW++ G  + +R+  + E+RC+G
Sbjct:   69 KTLILIDFGIYRERFIVHENKNNLVVQGMGYSRTSIEWNNTTAS----------SNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKENTIGCITANGKDTLKDRTGFVFVNCKIT---GSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYG 298          
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.200e-45
Identity = 92/233 (39.48%), Postives = 132/233 (56.65%), Query Frame = 3
Query:   15 IRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKS--QGFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFG 707
            I + PG+YR+ V +P  K  ITL+G    NT L W++              G       ++ +   DFV   +T +N     +G+AVA+RV AD+ AFY C    +QDTL    G  Y K+CYIEG+ DFI G++++L E CH+H  S   G ITAQ R S+ E +G+ FL C +TG+G T   +LGRPWG + RVVFA+++    +   GW+ WG    E +  + EY+C+G
Sbjct:   83 IWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWSD--------------GEDILESPTLTIFASDFVCRFLTIQNKFGT-AGRAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGSITAQMRTSATEKSGFTFLGCKLTGSGST---FLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYG 297          
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.048e-43
Identity = 96/246 (39.02%), Postives = 139/246 (56.50%), Query Frame = 3
Query:    6 RTLIRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPE-----GSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ-------GFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFG 707
            +TLI ++ G YR+ V V + K  + + G   +NT + WN+TA    +          T    S +V   +F A NI+F+N+APE        QAVA+R+  D+ AFY C F G QDTL    G+ + K+C+I+GS+DFIFGN  +L + C I+  ++       G ITAQ R+S  E +G+ F+ C I    G+G I LGR WG +  VVF+ TYM   I   GW+NWG    E++  F E++C+G
Sbjct:  118 KTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGN----------TADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYG 350          
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.611e-43
Identity = 101/246 (41.06%), Postives = 137/246 (55.69%), Query Frame = 3
Query:    3 RRTLIRISPGVYRQPVYVPKTKNLITLAG--LCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENS----APEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIH--CKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGQVA 716
            +R  I I PG+YR+ V VPK+K  I+  G      +TV++W++ A+ +           GT+   SV +E + F A  ITFEN+    A E   QAVA+R+  D+  FY  R LG QDTL+   G  Y   CYI+G+VDFIFGN+ +L + C IH   K  G I A  R S  E TG+ F+ C I+   GTG IYLGR WG + R V++  ++   I  VGW +W   E +R   F EY C G+ A
Sbjct:  108 QRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKE----LGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYGAIAAHHRDSETEDTGFSFVNCDIS---GTGQIYLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGA 346          
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.272e-42
Identity = 94/239 (39.33%), Postives = 133/239 (55.65%), Query Frame = 3
Query:   15 IRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEG-----SGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ--GFITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENE-RSACFYEYRCFG 707
            I+I+PG YR+ V VP TK  IT  G   + T + W++ A+ +     A      T+   SV V    F A NI+F N+AP         QAVA R++ D+  F  C F G QDTL    G+ Y K+CYIEGS+DFIFGN  ++ + C +H  +   G I A  R   +E TG+ F+ C +T   GTG +Y+GR  G + R+V+A+TY D  + H GW +W    N+ ++A F  Y C+G
Sbjct:   91 IKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDL----GANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGSIAAHGRTCPEEKTGFAFVGCRVT---GTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYG 322          
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.290e-42
Identity = 97/240 (40.42%), Postives = 136/240 (56.67%), Query Frame = 3
Query:    6 RTLIRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPE----GSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGF--ITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFG 707
            R +I+++PGVY + V +   +  ITL G     TVLT++ TA +            GT    ++IV  E F A ++T +N+AP       GQA+A+R+ AD+ AFY+CRF G+QDTL    G  + KDCYIEG+ DFIFG   +L  +  +H    G   ITAQ R+S+ E  GY F+ C +TG  GTG IYLGR W    +VV+AFT M   +   GW        +++  + EY+CFG
Sbjct:   94 RVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQY-----------GTVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAVGDGLRVITAQGRQSATEQNGYTFVHCKVTGT-GTG-IYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFG 320          
BLAST of CX291435 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.386e-39
Identity = 92/242 (38.02%), Postives = 138/242 (57.02%), Query Frame = 3
Query:    3 RRTLIRISPGVYRQPVYVPKTKNLITLAGLCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVAENITFENSAPEGSG-----QAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGF--ITAQSRKSSQETTGYVFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFG 707
            RR +I+I PGVY++ V + ++K  ITL G      VLT++ TA +            GT    ++IV  + F+A NI  +NSAP   G     QA+++R++ ++ AFYNC+F G+QDT+    G  + KDCYIEG+ DFIFG+  +L     ++    G   ITA + KS+ E +GY F+ C +TG  GTG IYLGR W    +VV+A+T M   +   GW    +   +++  + EY+C G
Sbjct:   69 RRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQY-----------GTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGIRVITAHAGKSAAEKSGYSFVHCKVTGT-GTG-IYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRDKTVFYGEYKCTG 297          
The following BLAST results are available for this feature:
BLAST of CX291435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PME31_ARATH1.212e-12989.74Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME53_ARATH1.368e-5646.89Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME8_ARATH3.735e-4641.20Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME14_ARATH5.394e-4539.51Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME11_ARATH9.200e-4539.48Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME15_ARATH5.048e-4339.02Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME62_ARATH8.611e-4341.06Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME68_ARATH3.272e-4239.33Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PME50_ARATH7.290e-4240.42Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME63_ARATH3.386e-3938.02Putative pectinesterase 63 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC03007H06SK OF2 Citrus clementina cDNA clone C03007H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291435 ID=CX291435; Name=CX291435; organism=Citrus clementina; type=EST; length=718bp
CTCGTCGGACTCTGATTCGTATATCACCTGGGGTTTATAGACAGCCGGTG
TATGTGCCAAAGACTAAGAACCTCATTACACTCGCGGGTCTTTGTCCCGA
AAACACCGTACTCACTTGGAATAACACCGCCACTAAAATTGAACACCATC
AGGCTGCGAGGGTAATTGGGACTGGGACTTTTGGGTGTGGCAGTGTGATT
GTGGAAGGAGAAGATTTCGTTGCTGAGAATATCACTTTCGAGAATTCTGC
ACCTGAGGGTTCCGGCCAAGCTGTGGCAATCAGGGTAACTGCAGACCGAT
GCGCCTTCTATAACTGCAGGTTTCTTGGTTGGCAGGATACTCTTTACTTG
CATTATGGAAAACAGTATCTGAAAGATTGCTATATTGAAGGAAGTGTGGA
TTTTATATTTGGGAATAGTACTGCTCTCATAGAGCATTGTCATATCCACT
GCAAGTCGCAAGGTTTTATTACTGCACAAAGCAGGAAATCCTCTCAGGAG
ACAACTGGTTATGTGTTTTTGAGATGTGTGATCACTGGGAATGGAGGGAC
AGGATATATCTATCTTGGACGCCCATGGGGACCTTTCGGAAGGGTGGTCT
TTGCATTTACATATATGGATCAATGTATCAGACATGTAGGCTGGCATAAC
TGGGGCAAAGTGGAGAACGAGAGGAGTGCTTGCTTTTATGAGTATAGGTG
TTTTGGACAGGTAGCTGC
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