CX291457
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291457 vs. ExPASy Swiss-Prot
Match: UBE4_ARATH (Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana GN=PUB1 PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 5.506e-62 Identity = 112/127 (88.19%), Postives = 123/127 (96.85%), Query Frame = 3 Query: 3 FYDKFNIRHNIADLLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIITIDMKLANKDVSMLAFTSEQIAAPFLL 383 FYDKFNIRHNIA+LLEYLWQVPSHRNAWR+IAK+EEKGVYLNFLNFL+NDSIYLLDESLNKILE+K IEA+MSNTAEWE+RP QERQERTRLFHSQENI+ IDMKLAN+DV+MLAFTSE+I APFLL Sbjct: 694 FYDKFNIRHNIAELLEYLWQVPSHRNAWRRIAKDEEKGVYLNFLNFLVNDSIYLLDESLNKILEIKQIEADMSNTAEWEQRPTQERQERTRLFHSQENIVRIDMKLANEDVTMLAFTSEEITAPFLL 820
BLAST of CX291457 vs. ExPASy Swiss-Prot
Match: UBE4B_MOUSE (Ubiquitin conjugation factor E4 B OS=Mus musculus GN=Ube4b PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.791e-16 Identity = 39/126 (30.95%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 3 FYDKFNIRHNIADLLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIITIDMKLANKDVSMLAFTSEQIAAPFL 380 FYDKF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R E + + LA + V M ++Q+ PFL Sbjct: 857 FYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHLLTKQVQKPFL 980
BLAST of CX291457 vs. ExPASy Swiss-Prot
Match: UBE4B_HUMAN (Ubiquitin conjugation factor E4 B OS=Homo sapiens GN=UBE4B PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.791e-16 Identity = 39/126 (30.95%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 3 FYDKFNIRHNIADLLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIITIDMKLANKDVSMLAFTSEQIAAPFL 380 FYDKF IR++I+ + + LWQ +H + + ++ ++ ++N LIND+ +LLDESL + + ++ EM N +W++ P ++Q R E + + LA + V M ++Q+ PFL Sbjct: 986 FYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ--FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFL 1109
BLAST of CX291457 vs. ExPASy Swiss-Prot
Match: UBE4A_RAT (Ubiquitin conjugation factor E4 A OS=Rattus norvegicus GN=Ube4a PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.546e-11 Identity = 36/133 (27.07%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 3 FYDKFNIRHNIADLLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIITIDMKLANKDVSMLAFTSEQIAAPFL 380 F KFN R + +L Y+W S+R + + +A K + +L FLN L+ND+I+LLDE++ + ++K+ + E + EWE + R+E+ + ++N+ + L+F + +I + F+ Sbjct: 738 FEQKFNYRRPMYPILRYMWGTDSYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWESLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLSFLTSEIKSLFV 869
BLAST of CX291457 vs. ExPASy Swiss-Prot
Match: UBE4A_BOVIN (Ubiquitin conjugation factor E4 A OS=Bos taurus GN=UBE4A PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.855e-11 Identity = 35/133 (26.32%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 3 FYDKFNIRHNIADLLEYLWQVPSHRNAWRQIAKEEEKGV-------YLNFLNFLINDSIYLLDESLNKILELKVIEAEMSNTAEWERRPAQERQERTRLFHSQENIITIDMKLANKDVSMLAFTSEQIAAPFL 380 F KFN R + +L+Y+W ++R + + +A K + +L FLN L+ND+I+LLDE++ + ++K+ + E + EW+ + R+E+ + ++N+ + LAF + +I + F+ Sbjct: 738 FEQKFNYRRPMYPILKYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIE-KDRGEWDNLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFV 869 The following BLAST results are available for this feature:
BLAST of CX291457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291457 ID=CX291457; Name=CX291457; organism=Citrus clementina; type=EST; length=385bpback to top |