CX291554
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS173_ARATH (40S ribosomal protein S17-3 OS=Arabidopsis thaliana GN=RPS17C PE=2 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 5.419e-36 Identity = 82/128 (64.06%), Postives = 96/128 (75.00%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGMLVISVIELLEAQITCLP 481 MGRVRTKTVKKSSRQVI+++YSRMTL+FHTN KILEE IIPSKRLRN IAGFS HLMKRI KGPVRGISL L + RE M + DES I I+++ VD +T M+ +LGM I+ I +E Q P Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQVETQQAMAP 128
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS172_ARATH (40S ribosomal protein S17-2 OS=Arabidopsis thaliana GN=RPS17B PE=2 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 3.512e-35 Identity = 82/128 (64.06%), Postives = 93/128 (72.66%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGMLVISVIELLEAQITCLP 481 MGRVRTKTVKKSSRQVI+++YSRMTL+FHTN KILEE IIPSKRLRN IAGFS HLMKRI KGPVRGISL L + RE M + DES I + I VD +T M+ +LGM S I +E Q P Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAVEPQQAMAP 128
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS174_ARATH (40S ribosomal protein S17-4 OS=Arabidopsis thaliana GN=RPS17D PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.335e-34 Identity = 81/128 (63.28%), Postives = 92/128 (71.88%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGMLVISVIELLEAQITCLP 481 MGRVRTKTVKKSSRQVI+++YSRMTL+FHTN KILEE IIPSKRLRN IAGFS HLMKRI KGPVRGISL L + RE M + DES I + I VD +T M+ +LGM I +E Q P Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAVEPQQAMAP 128
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS171_ARATH (40S ribosomal protein S17-1 OS=Arabidopsis thaliana GN=RPS17A PE=1 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 3.883e-34 Identity = 81/125 (64.80%), Postives = 94/125 (75.20%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGM---LVISVIELLEA 463 MGRVRTKTVKKSSRQVI+++YSRMTL+FHTN KILEE IIPSKRLRN IAGFS HLMKRI KGPVRGISL L + RE M + DES I + I VD +T M+ +LGM L IS ++ +A Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGISAVDPQQA 125
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS17_SOLLC (40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17 PE=2 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 1.476e-33 Identity = 78/111 (70.27%), Postives = 87/111 (78.38%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGM 430 MGRVRTKTVKKSSRQVI+R+YS+MTL+FHTN KILEE IIPSKRLRN IAGFS HLMKRI KGPVRGISL L + RE M + DES I + I VD +T M+ ALGM Sbjct: 1 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGM 111
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS17_BOVIN (40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.643e-24 Identity = 59/124 (47.58%), Postives = 84/124 (67.74%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGMLVISVIELLEAQI 469 MGRVRTKTVKK++R +I+++Y+R+ +FHTN ++ EE IIPSK+LRN IAG+ HLMKRI +GPVRGIS+ L + RE Y + S + E I VDP T M+ L +S +++ + + Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLDNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV 124
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS17A_SCHPO (40S ribosomal protein S17-A OS=Schizosaccharomyces pombe GN=rps17a PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.643e-24 Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGMLVISVIELLEA 463 MGRVRTKT K++SR VI+++Y R+TL+F TN +I++E II SKRLRN IAG++ HLMKRI +GPVRGIS L + RE Y + S + ++ + VD T M+ +LG I V L A Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNKRIVDEVAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEVDRVNVDQDTKDMLKSLGYDQIPVRVLAPA 122
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS17_PIG (40S ribosomal protein S17 OS=Sus scrofa GN=RPS17 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 4.758e-24 Identity = 59/124 (47.58%), Postives = 84/124 (67.74%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGMLVISVIELLEAQI 469 MGRVRTKTVKK++R +I+++Y+R+ +FHTN ++ EE IIPSK+LRN IAG+ HLMKRI +GPVRGIS+ L + RE Y + S + E I VDP T M+ L +S +++ + + Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV 124
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS17_MOUSE (40S ribosomal protein S17 OS=Mus musculus GN=Rps17 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 4.758e-24 Identity = 59/124 (47.58%), Postives = 84/124 (67.74%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGMLVISVIELLEAQI 469 MGRVRTKTVKK++R +I+++Y+R+ +FHTN ++ EE IIPSK+LRN IAG+ HLMKRI +GPVRGIS+ L + RE Y + S + E I VDP T M+ L +S +++ + + Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV 124
BLAST of CX291554 vs. ExPASy Swiss-Prot
Match: RS17_ICTPU (40S ribosomal protein S17 OS=Ictalurus punctatus GN=rps17 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 4.758e-24 Identity = 59/124 (47.58%), Postives = 84/124 (67.74%), Query Frame = 2 Query: 98 MGRVRTKTVKKSSRQVIDRHYSRMTLNFHTN*KILEEADIIPSKRLRNTIAGFSFHLMKRILKGPVRGISLMLP*DYRELLMYYASDESFIMIENIMVDPKTSHMIVALGMLVISVIELLEAQI 469 MGRVRTKTVKK++R +I+++Y+R+ +FHTN ++ EE IIPSK+LRN IAG+ HLMKRI +GPVRGIS+ L + RE Y + S + E I VDP T M+ L +S +++ + + Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTV 124 The following BLAST results are available for this feature:
BLAST of CX291554 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291554 ID=CX291554; Name=CX291554; organism=Citrus clementina; type=EST; length=589bpback to top |