CX291568
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291568 vs. ExPASy Swiss-Prot
Match: OPRR_PSEAE (Putative transcriptional regulator OS=Pseudomonas aeruginosa GN=PA2220 PE=4 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.549e-37 Identity = 76/173 (43.93%), Postives = 106/173 (61.27%), Query Frame = -1 Query: 231 IKVEIMTDYGLTDIVADRYDIGIRHGDQVAKDMIAVRMXADMKMAIVGSPTYLENKPQPKKPQDLMQHNCINLRLPTLGGFYAWELKKGSREVQVRVEGQLSFNGSYHMXXXXXXXXXXXXLPSDLVQAHVTAGRLVRVLDDWCPTFPGLHXXXXXXXXXXXXXXLVIDSLRY 749 IKVE +YG DIVADR+D G+R GD + KDMIAV + ++MA+V +P Y P+P+ P+DL+ HNCIN+R+ + GG YAW+ ++ R V VRV+GQL FN S ++ LP + H+ GRL+RVL++WCP FPG + LV+D+LRY Sbjct: 123 IKVEFDINYGFRDIVADRFDAGVRLGDTIDKDMIAVPIGPPVRMAVVAAPAYFAAHPKPRSPRDLVDHNCINMRMQSGGGLYAWDFQRKDRHVNVRVDGQLIFNTSPNIVDAALAGLGIAWLPEEEFAPHIEEGRLLRVLENWCPLFPGYYLYYPNRRQPSPAFSLVVDALRY 295
BLAST of CX291568 vs. ExPASy Swiss-Prot
Match: YCJZ_ECOLI (Uncharacterized HTH-type transcriptional regulator ycjZ OS=Escherichia coli (strain K12) GN=ycjZ PE=4 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.705e-29 Identity = 69/174 (39.66%), Postives = 95/174 (54.60%), Query Frame = -1 Query: 228 IKVEIMTDYGLTDIVADRYDIGIRHGDQVAKDMIAVRMXADMKMAIVGSPTYLENKPQPKKPQDLMQHNCINLRLPTLGGFYAWELKKGSREVQVRVEGQLSFNGSYHMXXXXXXXXXXXXLPSDLVQAHVTAGRLVRVLDDWCPTFPGLHXXXXXXXXXXXXXXLVIDSLRYR 749 I +++ DYGLTD+V++R+D G+R G ++ KDMIA+R+ D+ MAIVGSP Y + P L+ H INL LPT G W L +G REV+VR+EGQL N + LP D V+ + +L+RVLD + P PG H L ID L+Y+ Sbjct: 123 IDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRIGPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYYPHRRHAGSAFSLFIDRLKYK 296
BLAST of CX291568 vs. ExPASy Swiss-Prot
Match: YCAN_ECOLI (Uncharacterized HTH-type transcriptional regulator ycaN OS=Escherichia coli (strain K12) GN=ycaN PE=4 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.001e-14 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = -1 Query: 303 IKVEIMTDYGLTDIVADRYDIGIRHGDQVAKDMIAVRMXADMKMAIVGSPTYLENKPQPKKPQDLMQHNCINLRLPTLGGFYAWELKKGSREVQVRVEGQLSFNGSYHMXXXXXXXXXXXXLPSDLVQAHVTAGRLVRVLDDWCPTFPG 749 IKVE+ TD L DIV +D G+R V KDMI+V + +K+ + +P Y +P+ P DL+ H C+ R P+ G + W+ K E+++ V G + + L + ++ ++ GRL VL+DW PG Sbjct: 122 IKVELTTDDSLVDIVQQGFDAGVRLSCIVEKDMISVAIGPPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPS-GKPFHWQFAK---ELEIAVAGNIILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLEDWSTERPG 266 The following BLAST results are available for this feature:
BLAST of CX291568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291568 ID=CX291568; Name=CX291568; organism=Citrus clementina; type=EST; length=749bpback to top |