CX291816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 6.965e-19 Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 1 Query: 49 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI-----SAVPWWN 483 +PR +H+ +S E E + +LA P + ++TV D +TGK ++ R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP ++ +AV W+N Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYN 487
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA2_CAEEL (Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.896e-18 Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = 1 Query: 31 VEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDE----FNTKNGGQRMATVLMYLSDVEEGGETVF 441 VE++ ++P A ++ N + E E + LA+P ++++TV +S TG+ + + R S +L DFT L E LQV +Y G Y+PHFD+ E F T N G R+ATVL Y+S E GG TVF Sbjct: 318 VEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVF 458
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17 Identity = 54/154 (35.06%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 49 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI-----SAVPWWN 483 +PR + + +S EE E + LA P + ++TV D +TGK + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP ++ +AV W+N Sbjct: 316 KPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYN 469
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA1_PONAB (Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.241e-17 Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 49 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI-----SAVPWWN 483 +PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP ++ +AV W+N Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYN 487
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.241e-17 Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 49 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI-----SAVPWWN 483 +PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP ++ +AV W+N Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYN 487
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA1_HUMAN (Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.241e-17 Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 49 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI-----SAVPWWN 483 +PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP ++ +AV W+N Sbjct: 334 KPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYN 487
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA1_BOVIN (Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.991e-17 Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 49 EPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI-----SAVPWWN 483 +PR +H+ +S E E + +LA P +R++T+ + TG + R S +L+ D T L + E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDV GG TVFP ++ +AV W+N Sbjct: 334 KPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVLAGGATVFPEVGASVWPKKGTAVFWYN 487
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.452e-16 Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 46 WE-PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT--KNGGQRMATVLMYLSDVEEGGETVFPNAQGNI-----SAVPWWN 483 W+ P Y++ +S EE E + LA P + ++TV D TG + R S ++L T L ++ E LQV +Y G +YEPHFD+ F++ K+ G R+AT L Y+SDVE GG TVFP+ I +AV W+N Sbjct: 334 WDSPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYN 487
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA2_HUMAN (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.519e-16 Identity = 60/175 (34.29%), Postives = 83/175 (47.43%), Query Frame = 1 Query: 10 GGRAEQWV-----EVISWE-PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI-----SAVPWWNEL 489 G RA Q + E W+ P Y++ +S EE E + +A P + ++TV D TG + R S ++L T L ++ E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDVE GG TVFP+ I +AV W+N L Sbjct: 316 GNRAPQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLL 490
BLAST of CX291816 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 9.413e-16 Identity = 55/158 (34.81%), Postives = 77/158 (48.73%), Query Frame = 1 Query: 46 WE-PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNI-----SAVPWWNEL 489 W+ P Y++ +S EE E + +A P + ++TV D TG + R S ++L T L ++ E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDVE GG TVFP+ I +AV W+N L Sbjct: 335 WDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLL 492 The following BLAST results are available for this feature:
BLAST of CX291816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291816 ID=CX291816; Name=CX291816; organism=Citrus clementina; type=EST; length=556bpback to top |