CX291875

Overview
NameCX291875
Unique NameCX291875
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length510
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig656 contig Ccv1_Contig656:346..855. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX291875 vs. ExPASy Swiss-Prot
Match: MPPA_SOLTU (Mitochondrial-processing peptidase subunit alpha OS=Solanum tuberosum GN=MPP PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.335e-12
Identity = 33/43 (76.74%), Postives = 40/43 (93.02%), Query Frame = 2 
Query:    2 HFLKTVEGVTAKDIASVAQKLLSSPLTMASYGDVINVPSYDAV 130
            HFLK ++ V+AKDIASV QKL+SSPLTMASYGDV+++PSYDAV
Sbjct:  455 HFLKAIDAVSAKDIASVVQKLISSPLTMASYGDVLSLPSYDAV 497
The following BLAST results are available for this feature:
BLAST of CX291875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MPPA_SOLTU1.335e-1276.74Mitochondrial-processing peptidase subunit alpha O... [more]
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Properties
Property NameValue
Genbank descriptionC04006D08SK FlavFr1 Citrus clementina cDNA clone C04006D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291875 ID=CX291875; Name=CX291875; organism=Citrus clementina; type=EST; length=510bp
GCATTTCTTGAAGACTGTGGAAGGAGTTACAGCAAAGGATATTGCTTCCG
TAGCACAGAAGCTTCTTTCATCTCCTCTCACAATGGCATCATATGGAGAT
GTCATCAATGTCCCAAGCTATGATGCAGTCAGCAGCAAGTTCAAGTCAAA
AAAAAATTGATTTTTTTTCCTTTTTGGTATCAAACTGGGCAGGCTCCTTA
CCCGTTGTCTATATTGTTGTGCATCTGCATTCCTTTGAAGCTCTTTTCCG
GTCAACTGCAGTTCAAAATAAGAGATTTTCATGACACTCCCATTTTTATG
AATAATTTGGGTTTTAAGCAAGCAGCAGTTTTAAATATGATGCTGTATTG
ACAAACTTAATTGCCTCCTAGAAATATTTCTCATATTCTTTTGTAGTTTG
TTCCAGAAATTATCCAAAGGGAATCAATTCAAATAGCTGGTAGCGGTAAC
TCTTGACTGTGGCTGTTGAATGTGATGAAATTGCCTTTGATATAAAAAAA
AAAAAAAAAA
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