CX291884

Overview
NameCX291884
Unique NameCX291884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length492
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291884 vs. ExPASy Swiss-Prot
Match: Y2446_ARATH (Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.093e-16
Identity = 62/128 (48.44%), Postives = 76/128 (59.38%), Query Frame = 1 
Query:   91 MATPLILRNCPTLCTLNSNQPPLRTLTLTKHFSVSTTKTWSHSINSTKMGKSEITEEAEENVSVKQKKIFVAGATGSSGKRIVEQLLAKGFAVKAGVRDLDKAKTTLSKDNPSLQIM*QRVLPNYQKL 474
            MAT L+LR+   +    S+       T  K F          S  S KM K E      EN +VK KK+FVAGATG +GKRIVEQLL++GFAVKAGVRD++KAKT+  KD+PSLQI+   V     KL
Sbjct:    1 MATSLLLRHSSAVFFSQSS-----FFTKNKSF---------RSFTSIKMEKGEA-----EN-AVKTKKVFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSF-KDDPSLQIVRADVTEGPDKL 107
The following BLAST results are available for this feature:
BLAST of CX291884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2446_ARATH1.093e-1648.44Uncharacterized protein At2g34460, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionC04006E11SK FlavFr1 Citrus clementina cDNA clone C04006E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291884 ID=CX291884; Name=CX291884; organism=Citrus clementina; type=EST; length=492bp
AATTCGGCACGAGGGGCAAAGCCATGGCTTTGTAAAATTGAGAGGAAGCA
AAATCCCGAAAACTAAACAAACAAATCGAGTGAGTAGTCTATGGCCACTC
CTCTGATTCTGAGAAATTGTCCCACTCTCTGCACTCTCAACTCTAACCAA
CCCCCTCTCCGCACTCTCACATTAACTAAGCATTTCTCCGTTTCCACCAC
CAAAACCTGGTCGCATTCAATCAACTCCACCAAGATGGGAAAAAGTGAAA
TAACTGAGGAAGCAGAAGAAAATGTAAGTGTGAAGCAGAAGAAGATATTT
GTGGCTGGAGCAACTGGCAGTTCCGGGAAAAGGATTGTTGAGCAGCTTCT
AGCAAAGGGTTTTGCTGTCAAGGCCGGGGTTCGGGATTTGGACAAGGCTA
AAACTACTCTTTCCAAAGACAACCCATCTCTTCAAATTATGTGACAGAGG
GTTCTGCCAAACTATCAGAAGCTATAGGCGATGATTCAGAAG
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