CX291891

Overview
NameCX291891
Unique NameCX291891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14178 contig Ccv1_Contig14178:206..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 2.130e-76
Identity = 122/164 (74.39%), Postives = 137/164 (83.54%), Query Frame = 2
Query:   17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            GTK AR+W RT C FD +G+GKC+TGDCNGLL+CQ +G  PNTLAEYAL QFN++DF D+S +DGFNV MEFS  S  C R IKCTA+I G+CPNEL+ PGGCN PC VFKTD+YCCNSGNCG T FSKFFKDRCPD YSYPKDD TSTFTCP GT+YKVVFCP
Sbjct:   62 GTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 6.003e-71
Identity = 113/164 (68.90%), Postives = 132/164 (80.49%), Query Frame = 2
Query:   17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            GTK AR+WART C FD SG+G C+TGDC G+L+C+ YGA PNTLAEY L  FN++DF D+S +DGFNVPM+FS  S  C R I CTA+I G+CP+ELK  GGCN PC VFKTD+YCCNSG+CGPT +S+FFK RCPD YSYPKDD  STFTC  GTDY+VVFCP
Sbjct:   39 GTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 3.769e-65
Identity = 110/167 (65.87%), Postives = 131/167 (78.44%), Query Frame = 2
Query:   14 PGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG APNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+EYCC +  G+CGPT  S+FFK+RCPD YSYP+DD TS FTCP+GT+Y+VVFCP
Sbjct:   62 PGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 1.432e-64
Identity = 106/166 (63.86%), Postives = 135/166 (81.33%), Query Frame = 2
Query:   17 GTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            GTK ARIW RT C FD+SG+G+C+TGDC+G L+C G+G  PNTLAEYAL QFN++DF D+S +DGFN+PMEFS  S +C+R++ CTA+I G+CPN L+ PGGCN PC VF+T++YCC +  G+C  T +S+FFK RCPD YSYP+DD TSTFTC T T+Y+VVFCP
Sbjct:   60 GTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTC-TNTNYRVVFCP 223          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 3.191e-64
Identity = 107/170 (62.94%), Postives = 129/170 (75.88%), Query Frame = 2
Query:    8 AEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 508
            A  GTK AR+W RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+ +DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP EL+VPGGCN PC  F   +YCC  G CGPT FSKFFK RCPD YSYP+DD TSTFTCP G T+Y+V+FCP
Sbjct:   57 APRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.167e-64
Identity = 108/170 (63.53%), Postives = 128/170 (75.29%), Query Frame = 2
Query:    8 AEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 508
            A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCP+G T+Y+VVFCP
Sbjct:   57 APRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 7.108e-64
Identity = 106/170 (62.35%), Postives = 128/170 (75.29%), Query Frame = 2
Query:    8 AEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 508
            A  GTK ARIW RT C FD +G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCP+G T+Y+VVFCP
Sbjct:   57 APRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 9.283e-64
Identity = 106/170 (62.35%), Postives = 127/170 (74.71%), Query Frame = 2
Query:    8 AEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 508
            A  GTK ARIW RT C FD  G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCP+G T+Y+VVFCP
Sbjct:   49 APRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 1.583e-63
Identity = 110/171 (64.33%), Postives = 129/171 (75.44%), Query Frame = 2
Query:    8 AEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPS-CNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 508
            A  GT AARIWART C+FDASG+G C TGDC G+L+C GYG APNTLAEYALKQFN++DF D+S IDGFNVPM F     S C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + +C PT +S++FK +CPD YSYPKDDATSTFTCP GT+YKVVFCP
Sbjct:   57 APAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCTGYGRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 227          
BLAST of CX291891 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 2.701e-63
Identity = 108/170 (63.53%), Postives = 127/170 (74.71%), Query Frame = 2
Query:    8 AEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 508
            A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCP G T+Y+VVFCP
Sbjct:   57 APRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
The following BLAST results are available for this feature:
BLAST of CX291891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_ACTDE2.130e-7674.39Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN6.003e-7168.90Protein P21 OS=Glycine max PE=1 SV=1[more]
PRR1_TOBAC3.769e-6565.87Pathogenesis-related protein R major form OS=Nicot... [more]
OSL3_ARATH1.432e-6463.86Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
OSMO_TOBAC3.191e-6462.94Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OS81_SOLCO4.167e-6463.53Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
OS13_SOLCO7.108e-6462.35Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
TPM1_SOLLC9.283e-6462.35Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
ZEAM_MAIZE1.583e-6364.33Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
NP24_SOLLC2.701e-6363.53Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC04006F07SK FlavFr1 Citrus clementina cDNA clone C04006F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291891 ID=CX291891; Name=CX291891; organism=Citrus clementina; type=EST; length=557bp
GCACGAGGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCGAACCA
AATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTGACTGT
AACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACCTTGGC
CGAGTACGCGTTGAAGCAATTCAATGACATGGATTTCATTGACATGTCCA
ACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTCCCTCA
TGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGCCCGAA
TGAATTGAAGGTTCCTGGAGGATGTAACGGGCCGTGCCCCGTGTTCAAGA
CCGACGAGTACTGTTGCAATTCAGGCAACTGCGGACCTACAGGTTTCTCC
AAGTTTTTCAAGGATAGGTGCCCGGATGTTTACAGTTACCCTAAGGATGA
CGCTACCAGCACATTTACTTGCCCGACTGGGACAGACTACAAGGTTGTAT
TCTGCCCCTGAAGCATTTTTTTTCAGGGGTAGAAATGGAAATAGAAAACT
ATACGAC
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