CX291904

Overview
NameCX291904
Unique NameCX291904
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15191 contig Ccv1_Contig15191:288..839. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 2.146e-73
Identity = 132/181 (72.93%), Postives = 149/181 (82.32%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EIVG VTEVGSKV KFKVGD+VGVGC+VGSCRSC++C   LENYCPK I+TY +KY+DG+ TYGGYSD MVADEHF+VRIP+  PLD  APLLCAGIT YSPLR++GLDKPGM               KFAKAMGVKVTVISTSP K+ EA++ LGADSFLVSRDQD+MQAA+GTMDGIID
Sbjct:   71 EIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIID 251
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 8.438e-70
Identity = 126/181 (69.61%), Postives = 145/181 (80.11%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EIVGVVTEVG+KV  FKVGDKVGVGCMVGSCRSC+SC   LENYCPK+I+TY S Y+DGT+TYGGYSD MV +EHF VRIP+   LDATAPLLCAG+TVYSPL+ + LDKPG+               KF KA G KVTVISTSP+KK EAV RLGADSF+VSR+ ++MQ+AMGT+DGIID
Sbjct:   74 EIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIID 254
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 5.660e-66
Identity = 121/181 (66.85%), Postives = 140/181 (77.35%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC   +ENYCPK I TY   Y+D TITYGGYSD MV +E FV+RIP+  PLDA APLLCAGITVYSP++++GLDKPGM               KFAKAMG KVTVISTS  K+ EA+ RLGAD+FLVSRD  +++ AMGTMDGIID
Sbjct:   69 EIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIID 249
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.056e-64
Identity = 119/181 (65.75%), Postives = 137/181 (75.69%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EIVG+VTEVGSKV K K+GDKVGVG +VGSCR CD C+ DLENYC K I+TY + Y DGTI  GGYSD MVADEHF++R PE  PLDA APLLCAGIT YSPL+++GLDKPG+               KFAKA G KVTVISTS SKK EA++ LG D F+VS D  +MQAA+GT+DGIID
Sbjct:   73 EIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAVGTLDGIID 253
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 2.226e-62
Identity = 118/181 (65.19%), Postives = 136/181 (75.14%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EIVGVVTEVG+KV KF  GDKVGVG M GSCRSCDSC    ENYCPK+I+T  +K  D T+T+GGYSD MV  E F++RIP+  PLD  APLLCAG+TVYSP++++GLDKPGM               KFAKAMG KVTVISTS  K+ EAV RLGAD+FLVSRD  +M+ AMGTMDGIID
Sbjct:   69 EIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIID 249
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.214e-61
Identity = 118/181 (65.19%), Postives = 134/181 (74.03%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EIVG VTEVGSKV KFKVGD VGVGC+VGSC SC++C  D EN C K + TYA    DG+ITYGGY+D+MVAD+HFV+R PE  PLD+ APLLCAGIT YSPLR++GLDKPG                K AKA G  VTVISTS SKK EA+E+LGAD FLVS D D+MQAA GT+ GIID
Sbjct:   50 EIVGRVTEVGSKVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMVADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMAKAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIID 230
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 2.721e-60
Identity = 111/181 (61.33%), Postives = 136/181 (75.14%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EIVGVVTEVGSKV K KVGD VG+GC+VGSCRSC+SC  + E++C   I TY S Y DGT+T+GGYSDTMVADEHF++R P+  PLD+ APLLCAGIT YSPL++YGLDKPG                K AKA G +VTVI  S SK+ EA+E+LGADSFL++ DQ++M+ A  ++DGIID
Sbjct:   73 EIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQMKGARSSLDGIID 253
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 2.546e-58
Identity = 112/181 (61.88%), Postives = 130/181 (71.82%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EI GVVTE G  V+KFK GDKVGVGCMV SC SCDSC   LEN+CP VI TY S   DGT+TYGGYS  +V  E FVVR PE  PLD  APLLCAGITVYSP++++GL+ P                 KFAKA G+ VTVIS+SP K+ EA+ERLGAD+F+VS++ DEM AA GTMDGII+
Sbjct:   66 EIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFGMTVTVISSSPGKRQEALERLGADAFVVSKNADEMNAATGTMDGIIN 246
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.825e-56
Identity = 107/181 (59.12%), Postives = 136/181 (75.14%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EIVGVVT+VG  V KF+VGD VGVG +V SC++C++C  DLE YCPK + TY S Y  GT TYGGYSD +V  + +VV+ P+  PLDA APLLCAGITVYSP+++YG+ +PG                KF KA G+KVTVISTSP+K++EA+++LGADSFLVS+D ++M+AAMGTMD IID
Sbjct:   73 EIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNSPYK-GTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIID 252
[Close]
BLAST of CX291904 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.825e-56
Identity = 105/181 (58.01%), Postives = 130/181 (71.82%), Query Frame = 3 
Query:    9 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYASKYHDGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIID 551
            EI GVVTEVG  V++FK GD+VGVGCMV SCRSC+SC    EN+CP+ + TY S   DGT+TYGGYS  +V  E FVV  PE  PLD  APLLCAGITVY+P++++GL+ PG                KFA+A G+KVTVIS+SP KK EA+ERLGAD+F+VS   +EM+AA  TMDG+I+
Sbjct:   76 EIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDGVIN 256
The following BLAST results are available for this feature:
BLAST of CX291904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
MTDH_FRAAN2.146e-7372.93Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MESCR8.438e-7069.61Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH8_ARATH5.660e-6666.85Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
GEDH1_OCIBA4.056e-6465.75Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH7_ARATH2.226e-6265.19Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_PETCR3.214e-6165.19Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
MTDH_APIGR2.721e-6061.33Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH5_ORYSJ2.546e-5861.88Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
MTDH_MEDSA1.825e-5659.12Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH3_ORYSJ1.825e-5658.01Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionC04006G09SK FlavFr1 Citrus clementina cDNA clone C04006G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291904 ID=CX291904; Name=CX291904; organism=Citrus clementina; type=EST; length=552bp
GCACGAGGGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGT
AAATTCAAAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATG
CCGCTCTTGTGATAGCTGCGCCATTGATCTTGAGAACTACTGCCCCAAAG
TTATAATGACCTATGCCAGCAAGTACCATGATGGAACCATCACATACGGA
GGCTACTCTGACACTATGGTTGCCGATGAGCACTTTGTGGTCCGTATTCC
TGAAGGCGCACCACTTGACGCCACTGCCCCTCTCCTCTGTGCTGGTATCA
CAGTCTACAGTCCGTTGAGATTCTATGGACTCGACAAGCCTGGTATGCAT
GTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCTGTCAAATTCGC
AAAGGCTATGGGGGTTAAGGTGACTGTGATCAGTACCTCCCCTAGCAAGA
AGAGTGAAGCCGTTGAACGTCTTGGCGCTGATTCCTTTTTGGTCAGTCGT
GATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTATCATCGA
TA
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