CX292112
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.142e-19 Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MA+SSFKLEHPLERRQAE+ RIREKYPDRIPVIVEKAERSDIPDIDKKK + P L + V+ ++
Sbjct: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLV-PADLTVGQFVYVVR 66 HSP 2 Score: 72.4034 bits (176), Expect = 1.920e-12 Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
DK +YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN
Sbjct: 46 DKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 83
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.142e-19 Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MA+SSFKLEHPLERRQAE+ RIREKYPDRIPVIVEKAERSDIPDIDKKK + P L + V+ ++
Sbjct: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLV-PADLTVGQFVYVVR 66 HSP 2 Score: 72.4034 bits (176), Expect = 1.920e-12 Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
DK +YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN
Sbjct: 46 DKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 83
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.093e-18 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MA SSFKLEHPLERRQ ES+RIREKYPDRIPVIVE+AERSD+P+IDKKK + P L + V+ ++
Sbjct: 1 MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLV-PADLTVGQFVYVVR 66 HSP 2 Score: 72.0182 bits (175), Expect = 2.507e-12 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
DK +YLVPADLTVGQFVYVVRKRIKLSAEKAIF+FVKN
Sbjct: 46 DKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKN 83
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.535e-17 Identity = 47/67 (70.15%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MAKSSFKL+H LERRQAE+ RIREKY DRIPVIVEKAERSDIPDIDKKK + P L + V+ ++
Sbjct: 1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLV-PADLTVGQFVYVVR 66 HSP 2 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
DK +YLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN
Sbjct: 46 DKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKN 83
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.535e-17 Identity = 47/67 (70.15%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MAKSSFKL+H LERRQAE+ RIREKY DRIPVIVEKAERSDIPDIDKKK + P L + V+ ++
Sbjct: 1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLV-PADLTVGQFVYVVR 66 HSP 2 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
DK +YLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN
Sbjct: 46 DKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKN 83
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.535e-17 Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MA++SFKLEHPLERRQAESARIREKY DRIPVIVEKA+++D+P+IDKKK + P L + V+ ++
Sbjct: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLV-PADLTVGQFVYVVR 66 HSP 2 Score: 70.0922 bits (170), Expect = 9.527e-12 Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
DK +YLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN
Sbjct: 46 DKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKN 83
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.535e-17 Identity = 44/67 (65.67%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MA++SFKLEHPLERRQAESARIREKY DRIPVIVEKA+++D+P+IDKKK + P L + V+ ++
Sbjct: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLV-PADLTVGQFVYVVR 66 HSP 2 Score: 70.0922 bits (170), Expect = 9.527e-12 Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
DK +YLVPADLTVGQFVYVVRKRIKLS EKAIF+FVKN
Sbjct: 46 DKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKN 83
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.419e-17 Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MA SSFK EHPLE+RQAE+ARIREKYPDRIPVIVE+AE+SD+PDID+KK + P L + V+ ++
Sbjct: 1 MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLV-PADLTVGQFVYVVR 66 HSP 2 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
D+ +YLVPADLTVGQFVYVVRKRIKLS EKAIFIFVKN
Sbjct: 46 DRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKN 83
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.832e-17 Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MAKSSFK EH LE+R+AE+ARIREKYPDRIPVIVEKAE+SDIP IDKKK + P L + V+ ++
Sbjct: 1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLV-PADLTVGQFVYVIR 66 HSP 2 Score: 69.707 bits (169), Expect = 1.244e-11 Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
DK +YLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV N
Sbjct: 46 DKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDN 83
BLAST of CX292112 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 8.422e-16 Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 76 MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVEKAERSDIPDIDKKKLVASPF*LLIKSLVFCLK 276
MAKSSFK+ +PLE R +ES+RIREKYPDRIPVIVEKA +SD+PDIDKKK + P L + V+ ++
Sbjct: 1 MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLV-PADLTVGQFVYVVR 66 HSP 2 Score: 70.4774 bits (171), Expect = 7.294e-12 Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 2
Query: 482 DKCRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN 595
DK +YLVPADLTVGQFVYVVRKRIKL AEKAIF+FVKN
Sbjct: 46 DKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKN 83 The following BLAST results are available for this feature:
BLAST of CX292112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292112 ID=CX292112; Name=CX292112; organism=Citrus clementina; type=EST; length=597bpback to top |