CX292117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX292117 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 5.155e-18 Identity = 47/107 (43.93%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 2 NNTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSN---------------KQAQPDPNQWNAGY 277 NNTTVF+G L S+VT++ LR F +G +V+VKIP GK CGFVQ+ DR AE A+ + G + +RLSWGRS +Q QP Q N GY Sbjct: 311 NNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSAKQTALLQQAMLSNSLQVQQQQPGLQQPNYGY 417
BLAST of CX292117 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.500e-17 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 5 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPN 259 N+TVFVG L V++E L+ LF +G++V+VKIP GK CGFVQF +R AE A+ L G LG IRLSWGR+ N A P N Sbjct: 302 NSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRN-QNPIAAPALN 385
BLAST of CX292117 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 4.085e-15 Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 2 Query: 5 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRSPSNKQAQPDPNQWNAGYYGYAQG 295 NTTVFVG L T+ LR LF +G +++V+IP GK CGFV+F R AE +++ L G +GG IRLSWGR PS+ A+ + A Y + G Sbjct: 359 NTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGR-PSSSNAKTNSTIMGASQYMSSNG 454
BLAST of CX292117 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.458e-14 Identity = 33/74 (44.59%), Postives = 55/74 (74.32%), Query Frame = 2 Query: 5 NTTVFVGNLDSIVTDEHLRELFSQYGQLVHVKIPAGKRCGFVQFADRSCAEEALRMLNGTQLGGQNIRLSWGRS 226 NTTVFVG L S ++++ L+ F +G+++++KIP GK CGFVQ++++S AE+A+ + G +G +IRL+WG + Sbjct: 296 NTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHN 369 The following BLAST results are available for this feature:
BLAST of CX292117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292117 ID=CX292117; Name=CX292117; organism=Citrus clementina; type=EST; length=592bpback to top |