CX292127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX292127 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 6.035e-45 Identity = 102/178 (57.30%), Postives = 124/178 (69.66%), Query Frame = 1 Query: 4 KSGVYQFSSVK--YLPGTLQRNVSLSVRCMAKNEQQKDQ-----------STQPP-----KLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 483 +S V QF+++ Y+P TL+RNVSL VR MA+ E ++ ST P + P++STKFSD+ AFSGPAPERINGRLAMIGFVAA+ VE++KGQ + QLS GGVAWFLGT P F+GVSVESKS M+SDAE WNGR AM+GLVALA TEFVKG++LV Sbjct: 20 RSRVNQFTNIPSVYIP-TLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196
BLAST of CX292127 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.261e-34 Identity = 78/157 (49.68%), Postives = 106/157 (67.52%), Query Frame = 1 Query: 52 LQRNVSLSVRCMAKN------EQQKDQSTQP------PKLPRISTKFS-DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 483 ++RN +VR M ++ +QQK Q T P ++TK + D+F+F G APERINGR AMIGFVAA+ VEL+ G+DVF+Q+ +GGV WFL T P+++G+S E+K++GF SDAE+WNGRFAM+GLVALA TE+VKG L+ Sbjct: 41 MRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197
BLAST of CX292127 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.105e-30 Identity = 71/156 (45.51%), Postives = 92/156 (58.97%), Query Frame = 1 Query: 22 FSSVKYLP-GTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 483 F+ LP G+ + +L R + Q + + PP P+ ST D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T PL +G S E ++ M ++AELWNGRFAM+GLVALA TE + G+ + Sbjct: 10 FAGAAVLPRGSARSLPALGRRTLVVRAQTEGPNAPPPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITGTPFI 165
BLAST of CX292127 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.885e-30 Identity = 68/140 (48.57%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 67 SLSVRCMAKNEQQKDQSTQPPKLPRISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDG-GVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 483 +L R + Q + S PP P+ ST D AFSGPAPERINGRLAM+GFV ALAVE +G + +QL G G AWF T PL +G S E ++ M ++AELWNGRFAM+GLVALA TE + G+ + Sbjct: 31 ALGRRALVVRAQTEGPSAPPPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170
BLAST of CX292127 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.596e-29 Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 118 TQPPKLPRISTKFS-----DVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLS--DGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSDGFMTSDAELWNGRFAMMGLVALAVTEFVKGSTLV 483 T P P+ TK + D AFSGPAPERINGRLAM+GFVAAL+VE ++G + Q+ G+AWFL T PL +G SVESKS G ++DAELWNGRFAM+GLVALA TEF+ G+ V Sbjct: 101 TTIPAAPKPVTKKANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229
BLAST of CX292127 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.110e-14 Identity = 61/162 (37.65%), Postives = 76/162 (46.91%), Query Frame = 1 Query: 25 SSVKYLPGTLQRNVSLSVRCMAKNEQQKDQSTQPPKLPR--------ISTKFSDVFAFSGPAPERINGRLAMIGFVAALAVELSKGQDVFAQLSDGGVAWFLGTXXXXXXXXXXPLFKGVSVESKSD--GFMTSDAELWNGRFAMMGLVALAVTEFVKGSTL 480 +S+ P L R + C + + ST PP P + ++V FSG APE INGRLAM+GFVAAL ELS G+ V QL D L T P F K D G T DAE+ NGRFAM+G A+ V E ++G L Sbjct: 16 ASINVRPAPLLRTAAPKRVCKHIVRAENNPSTPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEMTNGRFAMIGFAAMLVYEGIQGIAL 171 The following BLAST results are available for this feature:
BLAST of CX292127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292127 ID=CX292127; Name=CX292127; organism=Citrus clementina; type=EST; length=510bpback to top |