CX292197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.550e-55 Identity = 97/156 (62.18%), Postives = 116/156 (74.36%), Query Frame = 2 Query: 230 MEGPGADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEFEALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 MEG G D+ S P+ K + R++QYYLD++TPH RWIGTL IY LRVY + GFYI++Y SP +DPE E DGA+LPT+GSDEF+PFIRRLPEFKFWY++TKAFC+AFLMTFFS+FDVPVFWPILLCYW+VLFVLT Sbjct: 1 MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHGFYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLT 156
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.501e-52 Identity = 95/157 (60.51%), Postives = 115/157 (73.25%), Query Frame = 2 Query: 230 MEGPGADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEFEAL-DGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 M+ G D+ S P+ + + R++Q+YLD++TPH RWIGTL A IY LRVY +QGFYI+ Y SP +DPE + DG SLPT+GSDEF+PFIRRLPEFKFWY++TKAFC+AFLMTFFS+FDVPVFWPILLCYWIVLFVLT Sbjct: 1 MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLT 157
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.317e-40 Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 2 Query: 245 ADAASAVAPIAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEFEALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 +D++S + + FS+ Q+ LD++ PH L RWI L IY++RVY V+GFYI+TY SP+ DPE G SLPT+ SDE+RPF+RRLPEFKFW +I +AF + F+MTFF +FDVPVFWPILL YW++LF LT Sbjct: 28 SDSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITYAIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLT 178
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.030e-36 Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 299 RMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 +++Q +LD+STPH RW+ TL + IY++RVY +QG+YIVTY SPK+DP ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK VA + TFF F+VPVFWPIL+ Y+I+LF +T Sbjct: 27 QIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCIT 161
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_RAT (Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36 Identity = 71/144 (49.31%), Postives = 99/144 (68.75%), Query Frame = 2 Query: 272 IAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 + ++ S +++Q +LD+STP+ RW+ TL + +Y++RVY +QG+YIVTY SPK+DP ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK VA + TFF F+VPVFWPIL+ Y+I+LF +T Sbjct: 18 VYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCIT 161
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_MOUSE (Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36 Identity = 71/144 (49.31%), Postives = 99/144 (68.75%), Query Frame = 2 Query: 272 IAKWRSDFSRMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 + ++ S +++Q +LD+STP+ RW+ TL + +Y++RVY +QG+YIVTY SPK+DP ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK VA + TFF F+VPVFWPIL+ Y+I+LF +T Sbjct: 18 VYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCIT 161
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_PONAB (Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.316e-35 Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 299 RMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 +++Q +LD+STP+ RW+ TL + +Y++RVY +QG+YIVTY SPK+DP ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK VA + TFF F+VPVFWPIL+ Y+I+LF +T Sbjct: 27 QIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCIT 161
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_HUMAN (Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.316e-35 Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 299 RMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 +++Q +LD+STP+ RW+ TL + +Y++RVY +QG+YIVTY SPK+DP ++ DG SLPTK ++EFRPFIRRLPEFKFW+A TK VA + TFF F+VPVFWPIL+ Y+I+LF +T Sbjct: 27 QIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCIT 161
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.529e-35 Identity = 70/135 (51.85%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 299 RMFQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDPEF--EALDGASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 +++Q +LD+STP+ RWI TL + IY++RVY +QG+YIVTY SPK+DP ++ DG SLPT+ ++EFRPFIRRLPEFKFW++ TK VA TFF F+VPVFWPIL+ Y+I+LF +T Sbjct: 27 QIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMACTFFEAFNVPVFWPILVMYFIMLFCIT 161
BLAST of CX292197 vs. ExPASy Swiss-Prot
Match: RER1_CAEEL (Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.274e-30 Identity = 67/134 (50.00%), Postives = 83/134 (61.94%), Query Frame = 2 Query: 305 FQYYLDRSTPHPLQRWIGTLAAASIYLLRVYCVQGFYIVTYXXXXXXXXXXXXXXSPKIDP--EFEALD-GASLPTKGSDEFRPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLT 697 +QYYLDR TPH RW+ L + + R+ +QGFYIV Y +P IDP EFE D G LP+K +DEFRPF+RRLPEFKFW++ KA +A TFF FDVPVFWPIL+ Y+ +L LT Sbjct: 23 YQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGIYYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAITCTFFEFFDVPVFWPILVMYFFILTFLT 156 The following BLAST results are available for this feature:
BLAST of CX292197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX292197 ID=CX292197; Name=CX292197; organism=Citrus clementina; type=EST; length=708bpback to top |