CX292424

Overview
NameCX292424
Unique NameCX292424
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX292424 vs. ExPASy Swiss-Prot
Match: ISAM2_ARATH (Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana GN=At5g03905 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.541e-15
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = -2 
Query:  495 NISYDFVKGATVDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 626
            N+SYD VKGAT+DY EELIR+AFVV+ NPSAVGGCSCKSSFMVK
Sbjct:  114 NVSYDLVKGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157
The following BLAST results are available for this feature:
BLAST of CX292424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ISAM2_ARATH4.541e-1584.09Iron-sulfur assembly protein IscA-like 2, mitochon... [more]
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Properties
Property NameValue
Genbank descriptionC04015E11SK FlavFr1 Citrus clementina cDNA clone C04015E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292424 ID=CX292424; Name=CX292424; organism=Citrus clementina; type=EST; length=627bp
ATGTATATATAAAGTGCACCATTTACAATGAAGATGTACTTCAAAATTCC
ACTATGTTAGCCACTAGAAAATCATTACACTGTTTTTGGACTGGTATCTC
ATCGAAACCAATCTTGCAGTTCCTGCTATTATTTGCCAGCATGGCGGCAG
CAGATCATGGTTGCCTACAAACGGCTAAGGAGAAATAGTACAATATAAAT
TCAATTCTCGATCCGCAAATGTGATGTAGTATGAAGATGGCACGTGTCTG
AACATGACATTCCTTGTTGATAGATAAGCGGCACATGCTTCAGACACCAA
ATGATATAGTAGAGATACATATGTCGCAGAAAAAGGGGAAAAAATTACAG
AGATGGATCTGATTCAAATGAATTGTAATGGAAAAAATTGAAGTAGAAAA
GTTGATTCAAAGATCCATTATAGCAAAACTTAGATAGTCTCTCAGCCAAA
TTAAAAGTATGGTATCATGGTTCATGGAATGGGAAAAACTACTGTTTCAC
CATAAAGGAGCTTTTACAACTGCATCCGCCCACTGCACTAGGATTTGTAC
TCACCACGAATGCAGAGCGGATCAGCTCCTCAACATAATCAACAGTTGCC
CCCTTTACAAAATCATATGAAATATTA
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