CX292438

Overview
NameCX292438
Unique NameCX292438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length586
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292438 vs. ExPASy Swiss-Prot
Match: NDUS6_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 6 OS=Arabidopsis thaliana GN=At1g49140 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.698e-42
Identity = 78/99 (78.79%), Postives = 88/99 (88.89%), Query Frame = 3
Query:   87 MGRKKATVEFDETAPD-FDPSDPYKDPVAMLEMREHIVREKWIDIEKAKIIREKLKWCYRIEGVNHMQKCRHLVNQYLESTRGIGWGKDGRHPSLHGPK 380
            MGRKK   EF+E+APD FDP +PYKDPVAM+EMREHIVREKWI IEKAKI+REK+KWCYR+EGVNH QKCRHLV QYL++TRG+GWGKD R  SLHGPK
Sbjct:    1 MGRKKGLPEFEESAPDGFDPENPYKDPVAMVEMREHIVREKWIHIEKAKILREKVKWCYRVEGVNHYQKCRHLVQQYLDATRGVGWGKDHRPISLHGPK 99          
The following BLAST results are available for this feature:
BLAST of CX292438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NDUS6_ARATH1.698e-4278.79NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
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Properties
Property NameValue
Genbank descriptionC04015G02SK FlavFr1 Citrus clementina cDNA clone C04015G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292438 ID=CX292438; Name=CX292438; organism=Citrus clementina; type=EST; length=586bp
GGAAACCAAGTGGAGAGCACACCCCACATAGACAACTAGGCTACCGGACT
AAACAAATCAACCAATCAAATTGCGAAAAACCGAAAATGGGAAGGAAGAA
GGCAACGGTTGAGTTCGATGAAACGGCGCCGGACTTCGATCCGTCGGACC
CGTACAAGGACCCGGTGGCGATGCTGGAGATGAGAGAGCACATAGTGAGG
GAGAAGTGGATCGACATCGAGAAGGCGAAGATCATAAGAGAGAAGCTCAA
GTGGTGCTATCGCATCGAAGGAGTTAATCACATGCAGAAGTGCCGTCACC
TCGTTAACCAGTACCTCGAGTCCACTCGCGGCATCGGCTGGGGCAAGGAC
GGCCGGCATCCCTCGCTTCACGGTCCGAAGGTGGAGGCTGTGGAGTCTGA
AGAATGATGATCTTTTTAAGGAATGAATAAGGTCATTGCACTTGGCCATG
TGGAGGAATGCCTAAAGTGTAGCAGTGGCTGGGCCAGTTCATCTTCCTGT
TTGCCTGTTGTTTTCTGTCTTGGGGGCTACTTATAACATTATTTATTTTC
CTATCTTCTTATGTTCAATATGGCAGCCAGATGATA
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