CX292783

Overview
NameCX292783
Unique NameCX292783
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD2_ARATH (Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 9.196e-57
Identity = 80/117 (68.38%), Postives = 97/117 (82.91%), Query Frame = 1
Query:  112 SEAPDPVYSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDC 462
            SEAP  + ++F++YSENG MTVDHLHRFLI+VQK+DKA++EDAQ+II+S   L      HR GL+L+AFFKYLFGD NPPL+    VHHDM AP+SHYFI+TGHNSYLTGNQL+SDC
Sbjct:   21 SEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL-----LHRNGLHLDAFFKYLFGDNNPPLA-LHKVHHDMDAPISHYFIFTGHNSYLTGNQLSSDC 131          

HSP 2 Score: 60.8474 bits (146), Expect = 9.196e-57
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 2
Query:  467 DVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 565
            +VPII AL+KGVRVIELDIWPNS KD++DVLHG
Sbjct:  133 EVPIIDALKKGVRVIELDIWPNSNKDDIDVLHG 165          

HSP 3 Score: 34.2686 bits (77), Expect = 9.196e-57
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = 2
Query:   50 MSKQTYRVCFCFRR 91
            MSKQTY+VCFCFRR
Sbjct:    1 MSKQTYKVCFCFRR 14          
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD7_ARATH (Phosphoinositide phospholipase C 7 OS=Arabidopsis thaliana GN=PLC7 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 6.432e-44
Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = 1
Query:  112 SEAPDPVYSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDC 462
            S AP  + ++FD YS+ G MT D L RFLI+VQK+DKA+KE+AQ I+++   L      HR GL+L+AFFKYLF   N PLS   V H DM AP+SHYFIYTGHNSYLTGNQL+SDC
Sbjct:   21 SVAPAEIKTLFDNYSDKGLMTTDLLLRFLIDVQKQDKATKEEAQDIVNASSSL-----LHRNGLHLDAFFKYLFAVTNSPLSSLEV-HQDMDAPLSHYFIYTGHNSYLTGNQLSSDC 131          

HSP 2 Score: 58.151 bits (139), Expect = 6.432e-44
Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  467 DVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 565
            ++PII AL+KGVRVIELDIWPNS +D +DVLHG
Sbjct:  133 ELPIIEALKKGVRVIELDIWPNSDEDGIDVLHG 165          
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD1_ARATH (Phosphoinositide phospholipase C 1 OS=Arabidopsis thaliana GN=PLC1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.042e-35
Identity = 58/119 (48.74%), Postives = 77/119 (64.71%), Query Frame = 1
Query:  103 VAESEAPDPVYSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSD 459
            V  SE P+ + ++F  YS++  M+ D + RF+I+VQ E  A   D   + D    LKH  +FH RG++LE F++YL  D N PL  T  V  DM  P+SHYF+YTGHNSYLTGNQLNS+
Sbjct:   17 VKSSEPPEEIKNLFHDYSQDDRMSADEMLRFVIQVQGETHA---DINYVKDIFHRLKHHGVFHPRGIHLEGFYRYLLSDFNSPLPLTREVWQDMNQPLSHYFLYTGHNSYLTGNQLNSN 132          

HSP 2 Score: 48.521 bits (114), Expect = 2.042e-35
Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 2
Query:  473 PIIRALQKGVRVIELDIWPNSKKDNVDVLHGG 568
            PI++AL+ GVRVIELD+WPNS     +V HGG
Sbjct:  137 PIVKALRNGVRVIELDLWPNSSGKEAEVRHGG 168          

HSP 3 Score: 20.4014 bits (41), Expect = 2.042e-35
Identity = 5/9 (55.56%), Postives = 9/9 (100.00%), Query Frame = 2
Query:   56 KQTYRVCFC 82
            K++++VCFC
Sbjct:    2 KESFKVCFC 10          
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD3_ARATH (Phosphoinositide phospholipase C 3 OS=Arabidopsis thaliana GN=PLC3 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.695e-34
Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = 1
Query:  115 EAPDPVYSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNS 456
            + P  +  +F+ YS NG M+ D L RF+ EVQ E  A  +  Q I  S+   KH N+FH  GL +L AF++YLF D N PL  +  VHHDM AP+SHYF+YTGHNSYLTGNQ+NS
Sbjct:   21 QPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSV---KHHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNS 132          

HSP 2 Score: 44.669 bits (104), Expect = 1.695e-34
Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 2
Query:  473 PIIRALQKGVRVIELDIWPNSKKDNVDVLHG 565
            PI++AL+KGV+VIELD+WPN   +  +V HG
Sbjct:  138 PIVQALRKGVKVIELDLWPNPSGNAAEVRHG 168          
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD5_ARATH (Phosphoinositide phospholipase C 5 OS=Arabidopsis thaliana GN=PLC5 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 6.847e-33
Identity = 57/117 (48.72%), Postives = 76/117 (64.96%), Query Frame = 1
Query:  121 PDPVYSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLR-ELKHLNIFHRRGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDC 462
            P  V + F +Y+E  + MT + L RFL+EVQ E +    DA+ II+ +  E  H+  F R  LNL+ FF +LF D +N P+     VH DM +P+SHYFIYT HNSYLTGNQ+NS+C
Sbjct:   26 PQDVVTAFVEYTEGRSHMTAEQLCRFLVEVQDETEVLVSDAEKIIERITCERHHITKFLRHTLNLDDFFSFLFSDDLNHPIDSK--VHQDMASPLSHYFIYTSHNSYLTGNQINSEC 140          

HSP 2 Score: 54.299 bits (129), Expect = 6.847e-33
Identity = 22/33 (66.67%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  467 DVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 565
            DVP+I+AL++GVR +ELD+WPNS KD++ VLHG
Sbjct:  142 DVPLIKALKRGVRALELDMWPNSTKDDILVLHG 174          
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD6_ARATH (Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 2.760e-31
Identity = 59/126 (46.83%), Postives = 75/126 (59.52%), Query Frame = 1
Query:   91 GGSTVAESEAPDPVYSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDS-LRELKHLNIFHRRGLNLEAFFKYLF-GDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDC 462
            GG T  +S   D            G M  + L  FL +    +  +  +AQ +ID  +R   H+  F R GL+L+ FF +LF  D+NPP+  TP VH DMTAP+SHYFIYTGHNSYLTGNQL+SDC
Sbjct:   53 GGGTDGDSSDGD---------GSTGVMGAEQLCSFLDD--HGESTTVAEAQRLIDEVIRRRHHVTRFTRHGLDLDDFFNFLFYDDLNPPI--TPHVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDC 165          

HSP 2 Score: 53.9138 bits (128), Expect = 2.760e-31
Identity = 22/33 (66.67%), Postives = 30/33 (90.91%), Query Frame = 2
Query:  467 DVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 565
            +VP+I+ALQ+GVRVIELD+WPNS   +++VLHG
Sbjct:  167 EVPVIKALQRGVRVIELDLWPNSTGTDINVLHG 199          
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD4_ARATH (Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana GN=PLC4 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.058e-26
Identity = 55/123 (44.72%), Postives = 79/123 (64.23%), Query Frame = 1
Query:  103 VAESEAPDPVYSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDS-LRELKHLNIFHRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDC 462
            + ES   + V  +F++Y+E    M+ + L + + E   E + S E+A+ I+D  LR   H+  F RR L L+ F  YLF  D+NPP++    VH +M AP+SHYFI+TGHNSYLTGNQL+S+C
Sbjct:   22 MTESGPVEDVRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFIFTGHNSYLTGNQLSSNC 142          

HSP 2 Score: 39.2762 bits (90), Expect = 1.058e-26
Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 2
Query:  467 DVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 565
            ++PI  AL++GVRV+ELD+WP    D+V V HG
Sbjct:  144 ELPIADALRRGVRVVELDLWPRG-TDDVCVKHG 175          
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD8_ARATH (Phosphoinositide phospholipase C 8 OS=Arabidopsis thaliana GN=PLC8 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.337e-14
Identity = 43/118 (36.44%), Postives = 60/118 (50.85%), Query Frame = 1
Query:  112 SEAPDPVYSMFDQ----YSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKH-LNIFHR-RGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGN 444
            + +PD +   F      Y ++   T+  L   L   ++ED A    A+ I   L   K  +  F R R L L+   ++LF   +NPP+     VHHDM AP+SHYFI+T  NSY TGN
Sbjct:   12 ANSPDLILQFFGNEFHGYGDDMPETLRRLTELLGYEKEEDGAGMNAAKKIAAELNRRKDDIPAFRRLRCLELDQLNEFLFSTKLNPPIGDQ--VHHDMHAPLSHYFIHTSLNSYFTGN 127          

HSP 2 Score: 38.1206 bits (87), Expect = 1.337e-14
Identity = 14/23 (60.87%), Postives = 21/23 (91.30%), Query Frame = 2
Query:  470 VPIIRALQKGVRVIELDIWPNSK 538
            +PII AL++GVRV+ELD+WP+ +
Sbjct:  135 LPIIEALEQGVRVVELDLWPDGR 157          
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD4_MACFA (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Macaca fascicularis GN=PLCD4 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.536e-11
Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = 1
Query:  130 VYSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQL 450
            V  +F+ +S +G  +T+     FL E QKE   + E A  +ID         + H   L+++ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL
Sbjct:  208 VQELFESFSADGQKLTLLEFSDFLREEQKERDCTSELALELIDRYEPSDSGKLRHV--LSMDGFLSYLCSKDGDIFNPACLP---IYQDMTQPLNHYFICSSHNTYLVGDQL 314          

HSP 2 Score: 28.8758 bits (63), Expect = 1.536e-11
Identity = 13/29 (44.83%), Postives = 19/29 (65.52%), Query Frame = 2
Query:  479 IRALQKGVRVIELDIWPNSKKDNVDVLHG 565
            IRAL++G R +E+D+W     + V V HG
Sbjct:  324 IRALKRGCRCVEVDVWDGPSGEPV-VYHG 351          
BLAST of CX292783 vs. ExPASy Swiss-Prot
Match: PLCD4_PIG (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Sus scrofa GN=PLCD4 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.996e-11
Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 1
Query:  130 VYSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQL 450
            V  +F+ +S +G  +T+     FL E QKE + + + A  +ID         + H   L+L+ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL
Sbjct:  215 VQELFENFSSDGQKLTLLEFVDFLQEEQKEGERASDLALELIDRHEPSDSGKLRHV--LSLDGFLSYLCSKDGDIFNPTCLP---IYQDMTQPLNHYFINSSHNTYLVGDQL 321          

HSP 2 Score: 29.261 bits (64), Expect = 1.996e-11
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 2
Query:  479 IRALQKGVRVIELDIWPNSKKDNVDVLHG 565
            IRAL++G R +E+DIW     + V V HG
Sbjct:  331 IRALKRGCRCVEVDIWDGPNGEPV-VYHG 358          
The following BLAST results are available for this feature:
BLAST of CX292783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PLCD2_ARATH9.196e-5768.38Phosphoinositide phospholipase C 2 OS=Arabidopsis ... [more]
PLCD7_ARATH6.432e-4460.68Phosphoinositide phospholipase C 7 OS=Arabidopsis ... [more]
PLCD1_ARATH2.042e-3548.74Phosphoinositide phospholipase C 1 OS=Arabidopsis ... [more]
PLCD3_ARATH1.695e-3453.04Phosphoinositide phospholipase C 3 OS=Arabidopsis ... [more]
PLCD5_ARATH6.847e-3348.72Phosphoinositide phospholipase C 5 OS=Arabidopsis ... [more]
PLCD6_ARATH2.760e-3146.83Phosphoinositide phospholipase C 6 OS=Arabidopsis ... [more]
PLCD4_ARATH1.058e-2644.72Phosphoinositide phospholipase C 4 OS=Arabidopsis ... [more]
PLCD8_ARATH1.337e-1436.44Phosphoinositide phospholipase C 8 OS=Arabidopsis ... [more]
PLCD4_MACFA1.536e-1136.611-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_PIG1.996e-1136.611-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]

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Properties
Property NameValue
Genbank descriptionC04019E02SK FlavFr1 Citrus clementina cDNA clone C04019E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292783 ID=CX292783; Name=CX292783; organism=Citrus clementina; type=EST; length=674bp
ATTCCCATCACTTTCACAGATTACCCTTTACTCAATCACGCGTTGGATCA
TGTCTAAACAGACTTACAGAGTCTGCTTCTGCTTCCGGCGGGCGGTTCCA
CAGTCGCCGAATCGGAGGCACCGGACCCCGTCTATTCCATGTTCGATCAG
TACTCCGAGAATGGCACCATGACGGTCGATCACCTTCACCGGTTCTTGAT
CGAGGTTCAGAAAGAAGATAAAGCCTCCAAAGAAGACGCGCAAGCGATCA
TCGATAGCTTGCGCGAGCTCAAGCACCTGAATATCTTTCATCGCAGGGGC
CTCAATCTTGAAGCTTTCTTTAAGTACCTCTTCGGTGATATTAATCCTCC
GCTTTCGCCTACTCCAGTGGTGCATCATGATATGACTGCCCCGGTGTCTC
ATTACTTTATATATACTGGCCACAATTCCTATCTGACTGGTAATCAGCTT
AATAGTGACTGCAGGCGACGTTCCCATCATACGTGCCCTGCAGAAAGGGG
TGAGAGTGATTGAGTTGGATATATGGCCAAATTCGAAGAAAGATAATGTG
GATGTTCTTCATGGAGGGTATGATTTATGTGCAATTGTTGCCACCCTGTG
GACATAGTACATTTTTGGAATCAAGCATTCTAACGCAACCTTTCTGTAGT
TTCTAACAGTGAGCATTGTTAGTC
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