CX292784

Overview
NameCX292784
Unique NameCX292784
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD2_ARATH (Phosphoinositide phospholipase C 2 OS=Arabidopsis thaliana GN=PLC2 PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.154e-62
Identity = 117/171 (68.42%), Postives = 139/171 (81.29%), Query Frame = 1
Query:   76 MSKQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 588
            MSKQTY+V           ASEAP  +K++F++YSENG MTVDHLHRFLI+VQK+DKA++EDAQ+II+S   L      HR GL+L+AFFKYLFGD NPPL+    VHHDM AP+SHYFI+TGHNSYLTGNQL+SDCS+VPII AL+KGVRVIELDIWPNS KD++DVLHG
Sbjct:    1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL-----LHRNGLHLDAFFKYLFGDNNPPLA-LHKVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSNKDDIDVLHG 165          
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD7_ARATH (Phosphoinositide phospholipase C 7 OS=Arabidopsis thaliana GN=PLC7 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.069e-53
Identity = 105/171 (61.40%), Postives = 126/171 (73.68%), Query Frame = 1
Query:   76 MSKQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 588
            MSKQTY+V            S AP  +K++FD YS+ G MT D L RFLI+VQK+DKA+KE+AQ I+++   L      HR GL+L+AFFKYLF   N PLS   V H DM AP+SHYFIYTGHNSYLTGNQL+SDCS++PII AL+KGVRVIELDIWPNS +D +DVLHG
Sbjct:    1 MSKQTYKVCFCFRRRYRHTVSVAPAEIKTLFDNYSDKGLMTTDLLLRFLIDVQKQDKATKEEAQDIVNASSSL-----LHRNGLHLDAFFKYLFAVTNSPLSSLEV-HQDMDAPLSHYFIYTGHNSYLTGNQLSSDCSELPIIEALKKGVRVIELDIWPNSDEDGIDVLHG 165          
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD1_ARATH (Phosphoinositide phospholipase C 1 OS=Arabidopsis thaliana GN=PLC1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.605e-41
Identity = 82/170 (48.24%), Postives = 111/170 (65.29%), Query Frame = 1
Query:   82 KQTYRVXXXXXXXXHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG 591
            K++++V         V +SE P+ +K++F  YS++  M+ D + RF+I+VQ E  A   D   + D    LKH  +FH RG++LE F++YL  D N PL  T  V  DM  P+SHYF+YTGHNSYLTGNQLNS+ S  PI++AL+ GVRVIELD+WPNS     +V HGG
Sbjct:    2 KESFKVCFCCVRNFKVKSSEPPEEIKNLFHDYSQDDRMSADEMLRFVIQVQGETHA---DINYVKDIFHRLKHHGVFHPRGIHLEGFYRYLLSDFNSPLPLTREVWQDMNQPLSHYFLYTGHNSYLTGNQLNSNSSIEPIVKALRNGVRVIELDLWPNSSGKEAEVRHGG 168          
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD3_ARATH (Phosphoinositide phospholipase C 3 OS=Arabidopsis thaliana GN=PLC3 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.502e-39
Identity = 81/151 (53.64%), Postives = 105/151 (69.54%), Query Frame = 1
Query:  139 EAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGL-NLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 588
            + P ++K +F+ YS NG M+ D L RF+ EVQ E  A  +  Q I  S+   KH N+FH  GL +L AF++YLF D N PL  +  VHHDM AP+SHYF+YTGHNSYLTGNQ+NS  S  PI++AL+KGV+VIELD+WPN   +  +V HG
Sbjct:   21 QPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSV---KHHNVFHHHGLVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHG 168          
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD5_ARATH (Phosphoinositide phospholipase C 5 OS=Arabidopsis thaliana GN=PLC5 PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37
Identity = 80/151 (52.98%), Postives = 107/151 (70.86%), Query Frame = 1
Query:  145 PDAVKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLR-ELKHLNIFHRRGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 588
            P  V + F +Y+E  + MT + L RFL+EVQ E +    DA+ II+ +  E  H+  F R  LNL+ FF +LF D +N P+     VH DM +P+SHYFIYT HNSYLTGNQ+NS+CSDVP+I+AL++GVR +ELD+WPNS KD++ VLHG
Sbjct:   26 PQDVVTAFVEYTEGRSHMTAEQLCRFLVEVQDETEVLVSDAEKIIERITCERHHITKFLRHTLNLDDFFSFLFSDDLNHPIDSK--VHQDMASPLSHYFIYTSHNSYLTGNQINSECSDVPLIKALKRGVRALELDMWPNSTKDDILVLHG 174          
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD6_ARATH (Phosphoinositide phospholipase C 6 OS=Arabidopsis thaliana GN=PLC6 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.522e-36
Identity = 78/142 (54.93%), Postives = 101/142 (71.13%), Query Frame = 1
Query:  169 DQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDS-LRELKHLNIFHRRGLNLEAFFKYLF-GDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 588
            D     G M  + L  FL +    +  +  +AQ +ID  +R   H+  F R GL+L+ FF +LF  D+NPP+  TP VH DMTAP+SHYFIYTGHNSYLTGNQL+SDCS+VP+I+ALQ+GVRVIELD+WPNS   +++VLHG
Sbjct:   62 DGDGSTGVMGAEQLCSFLDD--HGESTTVAEAQRLIDEVIRRRHHVTRFTRHGLDLDDFFNFLFYDDLNPPI--TPHVHQDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPVIKALQRGVRVIELDLWPNSTGTDINVLHG 199          
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD4_ARATH (Phosphoinositide phospholipase C 4 OS=Arabidopsis thaliana GN=PLC4 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.568e-31
Identity = 72/148 (48.65%), Postives = 102/148 (68.92%), Query Frame = 1
Query:  154 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDS-LRELKHLNIFHRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 588
            V+ +F++Y+E    M+ + L + + E   E + S E+A+ I+D  LR   H+  F RR L L+ F  YLF  D+NPP++    VH +M AP+SHYFI+TGHNSYLTGNQL+S+CS++PI  AL++GVRV+ELD+WP    D+V V HG
Sbjct:   31 VRDLFEKYTEGDAHMSPEQLQKLMTEEGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTDLNPPIADQ--VHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRG-TDDVCVKHG 175          
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD8_ARATH (Phosphoinositide phospholipase C 8 OS=Arabidopsis thaliana GN=PLC8 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17
Identity = 58/149 (38.93%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  136 SEAPDAVKSMFDQ----YSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKH-LNIFHR-RGLNLEAFFKYLFGD-INPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 561
            + +PD +   F      Y ++   T+  L   L   ++ED A    A+ I   L   K  +  F R R L L+   ++LF   +NPP+     VHHDM AP+SHYFI+T  NSY TGN      S +PII AL++GVRV+ELD+WP+ +
Sbjct:   12 ANSPDLILQFFGNEFHGYGDDMPETLRRLTELLGYEKEEDGAGMNAAKKIAAELNRRKDDIPAFRRLRCLELDQLNEFLFSTKLNPPIGDQ--VHHDMHAPLSHYFIHTSLNSYFTGNVFGK-YSILPIIEALEQGVRVVELDLWPDGR 157          
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD4_MACFA (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Macaca fascicularis GN=PLCD4 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 55/150 (36.67%), Postives = 81/150 (54.00%), Query Frame = 1
Query:  154 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 588
            V+ +F+ +S +G  +T+     FL E QKE   + E A  +ID         + H   L+++ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL    S    IRAL++G R +E+D+W     + V V HG
Sbjct:  208 VQELFESFSADGQKLTLLEFSDFLREEQKERDCTSELALELIDRYEPSDSGKLRHV--LSMDGFLSYLCSKDGDIFNPACLP---IYQDMTQPLNHYFICSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDVWDGPSGEPV-VYHG 351          
BLAST of CX292784 vs. ExPASy Swiss-Prot
Match: PLCD4_PIG (1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-4 OS=Sus scrofa GN=PLCD4 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:  154 VKSMFDQYSENGT-MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFHRRGLNLEAFFKYLF---GDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHG 588
            V+ +F+ +S +G  +T+     FL E QKE + + + A  +ID         + H   L+L+ F  YL    GDI NP   P   ++ DMT P++HYFI + HN+YL G+QL    S    IRAL++G R +E+DIW     + V V HG
Sbjct:  215 VQELFENFSSDGQKLTLLEFVDFLQEEQKEGERASDLALELIDRHEPSDSGKLRHV--LSLDGFLSYLCSKDGDIFNPTCLP---IYQDMTQPLNHYFINSSHNTYLVGDQLCGQSSVEGYIRALKRGCRCVEVDIWDGPNGEPV-VYHG 358          
The following BLAST results are available for this feature:
BLAST of CX292784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
PLCD2_ARATH2.154e-6268.42Phosphoinositide phospholipase C 2 OS=Arabidopsis ... [more]
PLCD7_ARATH9.069e-5361.40Phosphoinositide phospholipase C 7 OS=Arabidopsis ... [more]
PLCD1_ARATH1.605e-4148.24Phosphoinositide phospholipase C 1 OS=Arabidopsis ... [more]
PLCD3_ARATH1.502e-3953.64Phosphoinositide phospholipase C 3 OS=Arabidopsis ... [more]
PLCD5_ARATH1.406e-3752.98Phosphoinositide phospholipase C 5 OS=Arabidopsis ... [more]
PLCD6_ARATH4.522e-3654.93Phosphoinositide phospholipase C 6 OS=Arabidopsis ... [more]
PLCD4_ARATH2.568e-3148.65Phosphoinositide phospholipase C 4 OS=Arabidopsis ... [more]
PLCD8_ARATH3.599e-1738.93Phosphoinositide phospholipase C 8 OS=Arabidopsis ... [more]
PLCD4_MACFA5.747e-1536.671-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]
PLCD4_PIG7.505e-1537.331-phosphatidylinositol-4,5-bisphosphate phosphodie... [more]

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Properties
Property NameValue
Genbank descriptionC04019E03SK FlavFr1 Citrus clementina cDNA clone C04019E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292784 ID=CX292784; Name=CX292784; organism=Citrus clementina; type=EST; length=706bp
AATTCACAATCCCAAAACATTTTCAACATTCCCATCACTTTCACAGATTA
CCCTTTACTCAATCACGCGTTTGTCATGTCTAAACAGACTTACAGAGTCT
GCTTCTGCTTCCGGCGGCGGTTCCACGTCGCCGCATCGGAGGCGCCGGAC
GCCGTCAAGTCCATGTTCGATCAGTACTCCGAGAATGGCACCATGACGGT
CGATCACCTTCACCGCTTCTTGATCGAGGTTCAGAAAGAAGATAAAGCCT
CCAAAGAAGACGCGCAAGCGATCATCGATAGCTTGCGCGAGCTCAAGCAC
CTGAATATCTTTCATCGCAGGGGCCTCAATCTTGAAGCTTTCTTTAAGTA
CCTCTTCGGTGATATTAATCCTCCGCTTTCGCCTACTCCAGTGGTGCATC
ATGATATGACTGCCCCGGTGTCTCATTACTTTATATATACTGGCCACAAT
TCCTATCTGACTGGTAATCAGCTTAATAGTGACTGCAGCGACGTTCCCAT
CATACGTGCCCTGCAGAAAGGGGTGAGAGTGATTGAGTTGGATATATGGC
CAAATTCGAAGAAAGATAATGTGGATGTTCTTCATGGAGGGTATGATTTA
TGTGCAATTGTTGCCACCCTGTGGACATAGTACATTTTTGGAATCAAGCA
TTCTAAACGCACCTTTCTGTAGTTTCTAACAGTGAGCATTTGTAGTCTTG
TCATGC
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