CX292822

Overview
NameCX292822
Unique NameCX292822
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length610
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 8.391e-67
Identity = 109/143 (76.22%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    1 KCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            KC+TGDCNGLL+CQ +G  PNTLAEYAL QFN++DF D+S +DGFNV MEFS  S  C R IKCTA+I G+CPNEL+ PGGCN PC VFKTD+YCCNSGNCG T FSKFFKDRCPD YSYPKDD TSTFTCP GT+YKVVFCP
Sbjct:   83 KCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.174e-60
Identity = 98/142 (69.01%), Postives = 115/142 (80.99%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            C+TGDC G+L+C+ YGA PNTLAEY L  FN++DF D+S +DGFNVPM+FS  S  C R I CTA+I G+CP+ELK  GGCN PC VFKTD+YCCNSG+CGPT +S+FFK RCPD YSYPKDD  STFTC  GTDY+VVFCP
Sbjct:   61 CQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.368e-55
Identity = 95/144 (65.97%), Postives = 115/144 (79.86%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSG--NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            CETGDCNG+LECQGYG APNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+EYCC +G  +CGPT  S+FFK+RCPD YSYP+DD TS FTCP+GT+Y+VVFCP
Sbjct:   85 CETGDCNGMLECQGYGKAPNTLAEFALNQPNQ-DFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 1.641e-54
Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 429
            C+TGDC G+L+C G+G  PNTLAEYAL QF+ +DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP EL+VPGGCN PC  F   +YCC  G CGPT FSKFFK RCPD YSYP+DD TSTFTCP G T+Y+V+FCP
Sbjct:   82 CQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.144e-54
Identity = 93/145 (64.14%), Postives = 110/145 (75.86%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 429
            C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCP+G T+Y+VVFCP
Sbjct:   82 CQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 3.657e-54
Identity = 91/145 (62.76%), Postives = 118/145 (81.38%), Query Frame = 1
Query:    1 KCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            +C+TGDC+G L+C G+G  PNTLAEYAL QFN++DF D+S +DGFN+PMEFS  S +C+R++ CTA+I G+CPN L+ PGGCN PC VF+T++YCC +  G+C  T +S+FFK RCPD YSYP+DD TSTFTC T T+Y+VVFCP
Sbjct:   81 RCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTC-TNTNYRVVFCP 223          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 8.146e-54
Identity = 91/145 (62.76%), Postives = 111/145 (76.55%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 429
            C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCP+G T+Y+VVFCP
Sbjct:   74 CQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 8.146e-54
Identity = 91/145 (62.76%), Postives = 111/145 (76.55%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 429
            C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTCP+G T+Y+VVFCP
Sbjct:   82 CQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.064e-53
Identity = 93/145 (64.14%), Postives = 109/145 (75.17%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTG-TDYKVVFCP 429
            C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN PC  F   +YCC  G CGPT  SKFFK RCPD YSYP+DD TSTFTCP G T+Y+VVFCP
Sbjct:   82 CQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of CX292822 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.006e-52
Identity = 92/144 (63.89%), Postives = 111/144 (77.08%), Query Frame = 1
Query:    4 CETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSG--NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 429
            CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+E+CC +G  +CGPT  S+FFK RCPD YSYP+DD  S FTCP GT+Y+VVFCP
Sbjct:   85 CETGDCNGMLECQGYGKPPNTLAEFALNQPNQ-DFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
The following BLAST results are available for this feature:
BLAST of CX292822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
TLP_ACTDE8.391e-6776.22Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN1.174e-6069.01Protein P21 OS=Glycine max PE=1 SV=1[more]
PRR1_TOBAC7.368e-5565.97Pathogenesis-related protein R major form OS=Nicot... [more]
OSMO_TOBAC1.641e-5464.14Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OS81_SOLCO2.144e-5464.14Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
OSL3_ARATH3.657e-5462.76Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
TPM1_SOLLC8.146e-5462.76Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OS13_SOLCO8.146e-5462.76Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
NP24_SOLLC1.064e-5364.14Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
PRR2_TOBAC2.006e-5263.89Pathogenesis-related protein R minor form OS=Nicot... [more]

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Properties
Property NameValue
Genbank descriptionC04019H08SK FlavFr1 Citrus clementina cDNA clone C04019H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX292822 ID=CX292822; Name=CX292822; organism=Citrus clementina; type=EST; length=610bp
AAATGCGAGACCGGTGACTGTAACGGACTCCTCGAGTGCCAAGGCTACGG
TGCAGCACCTAACACCTTGGCCGAGTACGCGTTGAAGCAATTCAATGACA
TGGATTTCATTGACATGTCCAACATTGACGGATTCAATGTTCCCATGGAA
TTTAGCTCTGTCTCTCCCTCATGCAACCGCGTGATCAAGTGCACTGCTAA
CATTCTTGGCGAGTGCCCGAATGAATTGAAGGTTCCTGGAGGATGTAACG
GGCCGTGCCCCGTGTTCAAGACCGACGAGTACTGTTGCAATTCAGGCAAC
TGCGGACCTACAGGTTTCTCCAAGTTTTTCAAGGATAGGTGCCCGGATGT
TTACAGTTACCCTAAGGATGACGCTACCAGCACATTTACTTGCCCGACTG
GGACAGACTACAAGGTTGTATTCTGCCCCTGAAGCATTTTTTTTCAGGGG
TAGAAATGGAAATAGAAAACTATACGACATAGCCTTCTATATCTGTTATA
ATATTGGAATAAGGACCGTGTGGTCTTCACTGCCATAGAGCTGGAGCAGG
CACATGTAGTTATGTGCGTGTATGAACTATAATTTGTTCGTGAATTAAAA
GGAGAATAAC
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