CX293111
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293111 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 394.815 bits (1013), Expect = 3.907e-111 Identity = 195/212 (91.98%), Postives = 195/212 (91.98%), Query Frame = 1 Query: 16 KSYPKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGXXXXXXXXXXXXXXXXVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFF 651 KSY KIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTG VTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFF Sbjct: 78 KSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFF 289 HSP 2 Score: 28.4906 bits (62), Expect = 3.907e-111 Identity = 11/11 (100.00%), Postives = 11/11 (100.00%), Query Frame = 3 Query: 645 FFYGDAEDFRQ 677 FFYGDAEDFRQ Sbjct: 288 FFYGDAEDFRQ 298
BLAST of CX293111 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 394.815 bits (1013), Expect = 5.587e-110 Identity = 195/212 (91.98%), Postives = 195/212 (91.98%), Query Frame = 1 Query: 16 KSYPKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGXXXXXXXXXXXXXXXXVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFF 651 KSY KIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTG VTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFF Sbjct: 78 KSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYGFGAVIGLDPVAGTSKTTGLDPSILSFDSFDFSIPVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFF 289 HSP 2 Score: 24.6386 bits (52), Expect = 5.587e-110 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3 Query: 645 FFYGDAEDFRQ 677 FF GDAEDFRQ Sbjct: 288 FFDGDAEDFRQ 298
BLAST of CX293111 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.291e-40 Identity = 97/221 (43.89%), Postives = 131/221 (59.28%), Query Frame = 1 Query: 22 YPKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSL-RYGFGA------VIGLDPVAGTSK---TTGXXXXXXXXXXXXXXXXVTVIGTGLGGVAR--CITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDF 648 Y ++ H++SHGFI++APQLY SI P +E+ S AE+ +WL GL LP N+S A+ GHSRGG+TAFA++L ++G+ + +IG+DPV GT K T + VIG+GLG AR CAP G NH EFF C+ + HFVA DYGH+D+LDD+ ++ + S CKNG E R PMRR V G+VV+FLK + Sbjct: 72 YSQLMLHVSSHGFILIAPQLY-SIAGPDTMDEIKSTAEIMDWLSVGLNHFLPAQVTPNLSKFALSGHSRGGKTAFAVALKKFGYSSNLKISTLIGIDPVDGTGKGKQTPPPVLAYLPNSFDLDKTPILVIGSGLGETARNPLFPPCAPPGVNHREFFRECQGPA-WHFVAKDYGHLDMLDDDTKGIRGKS-SYCLCKNGEERR-PMRRFVGGLVVSFLKAY 288
BLAST of CX293111 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.436e-39 Identity = 93/218 (42.66%), Postives = 126/218 (57.80%), Query Frame = 1 Query: 22 YPKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG--------FGAVIGLDPVAGTSK--TTGXXXXXXXXXXXXXXXXVTVIGTGLGGV-ARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLK 642 Y + +HIASHG+I+VAPQL +PP E++ A V W + L+ +LP + AN +++GHSRGG+TAFA++L + F A+IG+DPVAGT+K T V V+GTGLG + CAP NHEEF+ CK +++AHFVA DYGHMD+LDD+ + ++ CKNG + MR V GIVVAFLK Sbjct: 72 YSDVLNHIASHGYILVAPQLCKLLPPGGQV-EVDDAGSVINWASENLKAHLPTSVNANGKYTSLVGHSRGGKTAFAVALGHAATLDPSITFSALIGIDPVAGTNKYIRTDPHILTYKPESFELDIPVAVVGTGLGPKWNNVMPPCAPTDLNHEEFYKECK-ATKAHFVAADYGHMDMLDDDLPGFVGF-MAGCMCKNGQRKKSEMRSFVGGIVVAFLK 286
BLAST of CX293111 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34 Identity = 90/226 (39.82%), Postives = 127/226 (56.19%), Query Frame = 1 Query: 16 KSYPKIFDHIASHGFIVVAPQLYTSIPP--PSATNELNSAAEVAEWLPQGLQ---QNLPENTEANVSLVAVMGHSRGGQTAFALSLRYG-------FGAVIGLDPVAGTS--KTTGXXXXXXXXXXXXXXXXVTVIGTGLGGVARCITACAPEGANHEEFFNRCKNSSRAHFVATDYGHMDILDDNPSDVKSWALSKYFCKNGNESRDPMRRCVSGIVVAFLKDFF 651 + Y F++IASHGFIVVAP+L+ PP PS +E++ AA VA W+P LQ Q E ++ +A+ GHSRGG++AFAL+L + F A+IG+DPVAG S T VTVIG+GLG +CAP +H++F++ CK +S +HFV T YGHMD+L++ + +S C + MRR + GI+VAFL +F Sbjct: 88 EDYSLFFNYIASHGFIVVAPKLFRLFPPKLPSQQDEIDMAASVANWMPLYLQVVLQRYVTGVEGDLEKLAISGHSRGGKSAFALALGFSNIKLDVTFSALIGVDPVAGRSVDDRTLPHVLTYKPNSFNLSIPVTVIGSGLGNHT---ISCAPNHVSHQQFYDECKENS-SHFVITKYGHMDMLNEFRLSPIAVTMS-LMCAQSFRPKATMRRTLGGIMVAFLNAYF 308 The following BLAST results are available for this feature:
BLAST of CX293111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX293111 ID=CX293111; Name=CX293111; organism=Citrus clementina; type=EST; length=688bpback to top |