CX293470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: PGIP_PYRCO (Polygalacturonase inhibitor OS=Pyrus communis GN=PGIP PE=1 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 6.076e-61 Identity = 113/146 (77.40%), Postives = 123/146 (84.25%), Query Frame = 3 Query: 6 SFGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESCK 443 SFG F G++PDLYLSHNQLSG IP S MDF +IDLSRNKLEGDAS +FGLNKTTQ +D+SRNLLEFNLSKVEFP SLT+LD+NHNKI+GSIP + T L N FLNVSYNRLCG IPVGGKLQSF YFHNRCLCGAPL SCK Sbjct: 186 SFGQFIGNVPDLYLSHNQLSGNIPTSFAQMDFTSIDLSRNKLEGDASVIFGLNKTTQIVDLSRNLLEFNLSKVEFPTSLTSLDINHNKIYGSIPVEFTQL-NFQFLNVSYNRLCGQIPVGGKLQSFDEYSYFHNRCLCGAPLPSCK 330
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: PGIP_VITVI (Polygalacturonase inhibitor OS=Vitis vinifera GN=pgip PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 8.498e-55 Identity = 104/147 (70.75%), Postives = 119/147 (80.95%), Query Frame = 3 Query: 3 ESFGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESCK 443 +SFG F GS P L+LSHNQLSGKIP S D N +DLSRNKLEGD S F NK+TQ +D SRNL +F+LS+VEFP+SLT+LDL+HNKI GS+P +TSL+ L FLNVSYNRLCG IPVGGKLQSF Y YFHNRCLCGAPL+SCK Sbjct: 188 DSFGKFAGSTPGLHLSHNQLSGKIPYSFRGFDPNVMDLSRNKLEGDLSIFFNANKSTQIVDFSRNLFQFDLSRVEFPKSLTSLDLSHNKIAGSLPEMMTSLD-LQFLNVSYNRLCGKIPVGGKLQSFDYDSYFHNRCLCGAPLQSCK 333
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 8.794e-52 Identity = 99/147 (67.35%), Postives = 117/147 (79.59%), Query Frame = 3 Query: 3 ESFGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESCK 443 ESFG+F G++PDL LSHNQLSG IP SLG++DFN IDLSRNKL+GDAS LFG NKTT ID+SRN+ +F++SKV+ P++L LDLNHN I G+IP Q T L F NVSYN+LCG IP GGKLQ+F YFHN+CLCGAPLE CK Sbjct: 185 ESFGSFPGTVPDLRLSHNQLSGPIPKSLGNIDFNRIDLSRNKLQGDASMLFGSNKTTWSIDLSRNMFQFDISKVDIPKTLGILDLNHNGITGNIPVQWTEAP-LQFFNVSYNKLCGHIPTGGKLQTFDSYSYFHNKCLCGAPLEICK 330
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.241e-47 Identity = 93/147 (63.27%), Postives = 111/147 (75.51%), Query Frame = 3 Query: 3 ESFGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESCK 443 ESFGTF+G +P L+LSHNQLSG IP SLG+ DF IDLSRNKL+GDAS LFG KTT +D+SRN+ +F+LSKV+ ++L NLD+NHN I GSIPA+ S LNVSYNRLCG IP G +Q F +FHN+CLCGAPL SCK Sbjct: 185 ESFGTFSGKVPSLFLSHNQLSGTIPKSLGNPDFYRIDLSRNKLQGDASILFGAKKTTWIVDISRNMFQFDLSKVKLAKTLNNLDMNHNGITGSIPAE-WSKAYFQLLNVSYNRLCGRIPKGEYIQRFDSYSFFHNKCLCGAPLPSCK 330
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: PGIP3_PHAVU (Polygalacturonase inhibitor 3 OS=Phaseolus vulgaris GN=PGIP3 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.968e-35 Identity = 68/146 (46.58%), Postives = 104/146 (71.23%), Query Frame = 3 Query: 3 ESFGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESC 440 +S+G+F+ + +S N+L+GKIP + +++ +DLSRN L+GDAS LFG +K TQ+I +++N L+F+L KV ++L LDL +N+I+G++P +T L+ L LNVS+N LCG IP GG LQ F + Y +N+CLCG+PL +C Sbjct: 196 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLQGDASVLFGSDKNTQKIHLAKNSLDFDLEKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPAC 341
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: PGIP2_PHAVU (Polygalacturonase inhibitor 2 OS=Phaseolus vulgaris GN=PGIP2 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.968e-35 Identity = 69/146 (47.26%), Postives = 103/146 (70.55%), Query Frame = 3 Query: 3 ESFGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESC 440 +S+G+F+ + +S N+L+GKIP + +++ +DLSRN LEGDAS LFG +K TQ+I +++N L F+L KV ++L LDL +N+I+G++P +T L+ L LNVS+N LCG IP GG LQ F + Y +N+CLCG+PL +C Sbjct: 196 DSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLPAC 341
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: PGIP1_PHAVU (Polygalacturonase inhibitor 1 OS=Phaseolus vulgaris GN=PGIP1 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 9.768e-35 Identity = 68/146 (46.58%), Postives = 103/146 (70.55%), Query Frame = 3 Query: 3 ESFGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESC 440 +S+G+F+ + +S N+L+GKIP + +++ +DLSRN LEGDAS LFG +K T++I +++N L F+L KV ++L LDL +N+I+G++P +T L+ L LNVS+N LCG IP GG L+ F + Y +N+CLCG+PL SC Sbjct: 196 DSYGSFSKLFTAMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTKKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLQSLNVSFNNLCGEIPQGGNLKRFDVSSYANNKCLCGSPLPSC 341
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: PGIP1_ORYSJ (Polygalacturonase inhibitor 1 OS=Oryza sativa subsp. japonica GN=FOR1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.118e-30 Identity = 67/143 (46.85%), Postives = 90/143 (62.94%), Query Frame = 3 Query: 12 GTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESC 440 G G L LS+NQL+G IP + NT+DLS N+L GDASFLF + ++D+S N L+F+LSK+ FP LT LDL+HN+I G++P + +L L L++SYNRLCGP+P + G Y HN+C GAPL C Sbjct: 187 GLVQGQFRSLILSYNQLTGPIPRDDAQDEINTVDLSHNRLTGDASFLFAAGRPIGKVDLSWNDLDFDLSKLVFPPELTYLDLSHNRIRGTVPRSLAALSTLQTLDLSYNRLCGPLPRLHGVIRHGCKPYEHNQCAGGAPLGGC 329
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.490e-16 Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 3 Query: 21 TGSIP----------DLYLSHNQLSGKIPASLGSMD-FNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPQS-LTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPL 431 TGSIP DL LS N + G IP +G+M + ++L N L G N ++SRN LE + V ++ L +LDL+HN + G IP ++S + +G L++S+N+LCG IP G T + N+CLCG PL Sbjct: 220 TGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLSHNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGGPL 368
BLAST of CX293470 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.583e-15 Identity = 58/151 (38.41%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 6 SFGTFTGSIP----------DLYLSHNQLSGKIPASLGSMDFNTI-DLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNL-SKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCG 422 S +F G IP L LS N SG IP +LG ++ I +LSRN L G FG ++ Q IDVS N L + +++ Q++ +L LN+NKI G IP Q+T+ +L LN+S+N L G IP F +F N LCG Sbjct: 416 SSNSFKGKIPAELGHIINLDTLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLNGTLPAEFGNLRSIQIIDVSFNFLAGVIPTELGQLQNINSLILNNNKIHGKIPDQLTNCFSLANLNISFNNLSGIIPPMKNFTRFSPASFFGNPFLCG 566 The following BLAST results are available for this feature:
BLAST of CX293470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293470 ID=CX293470; Name=CX293470; organism=Citrus clementina; type=EST; length=662bpback to top |