CX293746

Overview
NameCX293746
Unique NameCX293746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH_SOYBN (UDP-glucose 6-dehydrogenase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 2.811e-103
Identity = 188/196 (95.92%), Postives = 192/196 (97.96%), Query Frame = 3
Query:   60 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYA 647
            MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDIS SRI AWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHV EADIVFVSVNTPTKTQGLGAGKAADLTYWESAAR+IADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAI+DLFNPDRVLIGGRETPEGQKA++ LKDVYA
Sbjct:    1 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISKSRIAAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVFEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGQKAIQTLKDVYA 196          
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH1_ARATH (Probable UDP-glucose 6-dehydrogenase 1 OS=Arabidopsis thaliana GN=UGD1 PE=1 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.306e-100
Identity = 183/197 (92.89%), Postives = 189/197 (95.94%), Query Frame = 3
Query:   60 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH 650
            MVKICCIGAGYVGGPTMAVIALKCP +EVAVVDISV RINAWNSD LPIYEPGLD VVKQCRGKNLFFSTDVEKHV EADIVFVSVNTPTKT+GLGAGKAADLTYWESAAR+IADVS SDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAI+DLFNPDRVLIGGRETPEG KAV+ LK+VYAH
Sbjct:    1 MVKICCIGAGYVGGPTMAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQCRGKNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSVSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGFKAVQTLKNVYAH 197          
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH2_ARATH (Probable UDP-glucose 6-dehydrogenase 2 OS=Arabidopsis thaliana GN=UGD2 PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 1.886e-99
Identity = 182/197 (92.39%), Postives = 187/197 (94.92%), Query Frame = 3
Query:   60 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH 650
            MVKICCIGAGYVGGPTMAVIALKCP IEVAVVDISV RINAWNSDQLPIYEPGLD +VKQCRGKNLFFSTDVEKHV EADIVFVSVNTPTKT GLGAGKAADLTYWESAAR+IADVS SDKIVVEKSTVPVKTAEAIEKIL HNSKGIKFQILSNPEFLAEGTAI DLFNPDRVLIGGRETPEG KAV+ LK+VYA+
Sbjct:    1 MVKICCIGAGYVGGPTMAVIALKCPDIEVAVVDISVPRINAWNSDQLPIYEPGLDDIVKQCRGKNLFFSTDVEKHVREADIVFVSVNTPTKTTGLGAGKAADLTYWESAARMIADVSVSDKIVVEKSTVPVKTAEAIEKILMHNSKGIKFQILSNPEFLAEGTAIADLFNPDRVLIGGRETPEGFKAVQTLKEVYAN 197          
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH_DROME (UDP-glucose 6-dehydrogenase OS=Drosophila melanogaster GN=sgl PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.664e-71
Identity = 134/197 (68.02%), Postives = 159/197 (80.71%), Query Frame = 3
Query:   63 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH 650
            +K+CCIGAGYVGGPT AV+ALKCP I + +VD S  RI  WNSD+LPIYEPGLD VVK+CR  NLFFSTD+E  + EAD++F+SVNTPTKT G G G+AADL Y ESAAR+IA++++S+KIVVEKSTVPV+ AE+I  IL  N K GI + ILSNPEFLAEGTAI DL N DRVLIGG ETPEG +AV+ L  +Y H
Sbjct:    1 MKVCCIGAGYVGGPTCAVMALKCPDIVITLVDKSSERIAQWNSDKLPIYEPGLDEVVKKCRNVNLFFSTDIETAIKEADLIFISVNTPTKTCGNGKGRAADLKYVESAARMIAEIAQSNKIVVEKSTVPVRAAESIMHILRANQKPGIHYDILSNPEFLAEGTAINDLLNADRVLIGGEETPEGHQAVEKLSWIYEH 197          
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH_MOUSE (UDP-glucose 6-dehydrogenase OS=Mus musculus GN=Ugdh PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.557e-69
Identity = 132/196 (67.35%), Postives = 154/196 (78.57%), Query Frame = 3
Query:   66 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH 650
            KICCIGAGYVGGPT +VIA  CP I V VVD++ +RINAWNS  LPIYEPGL  VV+ CRGKNLFFST+++  + EAD+VF+SVNTPTKT G+G G+AADL Y E+ AR I   S   KIV EKSTVPV+ AE+I +I   N+K  +  Q+LSNPEFLAEGTAI+DL NPDRVLIGG ETPEGQKAV+AL  VY H
Sbjct:    6 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNEARINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIREADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQKAVRALCAVYEH 201          
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH_HUMAN (UDP-glucose 6-dehydrogenase OS=Homo sapiens GN=UGDH PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.557e-69
Identity = 132/196 (67.35%), Postives = 154/196 (78.57%), Query Frame = 3
Query:   66 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH 650
            KICCIGAGYVGGPT +VIA  CP I V VVD++ SRINAWNS  LPIYEPGL  VV+ CRGKNLFFST+++  + EAD+VF+SVNTPTKT G+G G+AADL Y E+ AR I   S   KIV EKSTVPV+ AE+I +I   N+K  +  Q+LSNPEFLAEGTAI+DL NPDRVLIGG ETPEGQ+AV+AL  VY H
Sbjct:    6 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEH 201          
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH_BOVIN (UDP-glucose 6-dehydrogenase OS=Bos taurus GN=UGDH PE=1 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 1.557e-69
Identity = 133/196 (67.86%), Postives = 154/196 (78.57%), Query Frame = 3
Query:   66 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH 650
            KICCIGAGYVGGPT +VIA  CP I V VVDI+ SRINAWNS  LPIYEPGL  VV+ CRGKNLFFST+++  + EAD+VF+SVNTPTKT G+G G+AADL Y E+ AR I   S   KIV EKSTVPV+ AE+I +I   N+K  +  Q+LSNPEFLAEGTAI+DL NPDRVLIGG ETPEGQ+AV+AL  VY H
Sbjct:    6 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVDINESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSHGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEH 201          
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH_CHICK (UDP-glucose 6-dehydrogenase OS=Gallus gallus GN=UGDH PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.656e-69
Identity = 130/196 (66.33%), Postives = 155/196 (79.08%), Query Frame = 3
Query:   66 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH 650
            KICCIGAGYVGGPT +VIA  CP I+V VVD++ +RINAWNSD LPIYEPGL  VV+ CRG+NLFFST ++  + EAD+VF+SVNTPTKT G+G G+AADL Y E+ AR I   S   KIV EKSTVPV+ AE+I +I   N+K  +  Q+LSNPEFLAEGTAI+DL NPDRVLIGG ++PEGQKAV+AL  VY H
Sbjct:    6 KICCIGAGYVGGPTCSVIAQMCPKIQVTVVDVNEARINAWNSDTLPIYEPGLKEVVESCRGRNLFFSTSIDDAIREADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLDLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDDSPEGQKAVRALCAVYEH 201          
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH_RAT (UDP-glucose 6-dehydrogenase OS=Rattus norvegicus GN=Ugdh PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.469e-69
Identity = 131/196 (66.84%), Postives = 154/196 (78.57%), Query Frame = 3
Query:   66 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH 650
            KICCIGAGYVGGPT +VIA  CP I V VVD++ +RINAWNS  LPIYEPGL  VV+ CRGKNLFFST+++  + EAD+VF+SVNTPTKT G+G G+AADL Y E+ AR I   S   KIV EKSTVPV+ AE+I +I   N+K  +  Q+LSNPEFLAEGTAI+DL NPDRVLIGG ETPEGQ+AV+AL  VY H
Sbjct:    6 KICCIGAGYVGGPTCSVIARMCPEIRVTVVDVNEARINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIREADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEH 201          
BLAST of CX293746 vs. ExPASy Swiss-Prot
Match: UGDH_PONAB (UDP-glucose 6-dehydrogenase OS=Pongo abelii GN=UGDH PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 3.835e-68
Identity = 131/196 (66.84%), Postives = 153/196 (78.06%), Query Frame = 3
Query:   66 KICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSK-GIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAH 650
            KICCIGAGYVGGPT +VIA   P I V VVD++ SRINAWNS  LPIYEPGL  VV+ CRGKNLFFST+++  + EAD+VF+SVNTPTKT G+G G+AADL Y E+ AR I   S   KIV EKSTVPV+ AE+I +I   N+K  +  Q+LSNPEFLAEGTAI+DL NPDRVLIGG ETPEGQ+AV+AL  VY H
Sbjct:    6 KICCIGAGYVGGPTCSVIAHMRPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEH 201          
The following BLAST results are available for this feature:
BLAST of CX293746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
UGDH_SOYBN2.811e-10395.92UDP-glucose 6-dehydrogenase OS=Glycine max PE=2 SV... [more]
UGDH1_ARATH1.306e-10092.89Probable UDP-glucose 6-dehydrogenase 1 OS=Arabidop... [more]
UGDH2_ARATH1.886e-9992.39Probable UDP-glucose 6-dehydrogenase 2 OS=Arabidop... [more]
UGDH_DROME1.664e-7168.02UDP-glucose 6-dehydrogenase OS=Drosophila melanoga... [more]
UGDH_MOUSE1.557e-6967.35UDP-glucose 6-dehydrogenase OS=Mus musculus GN=Ugd... [more]
UGDH_HUMAN1.557e-6967.35UDP-glucose 6-dehydrogenase OS=Homo sapiens GN=UGD... [more]
UGDH_BOVIN1.557e-6967.86UDP-glucose 6-dehydrogenase OS=Bos taurus GN=UGDH ... [more]
UGDH_CHICK2.656e-6966.33UDP-glucose 6-dehydrogenase OS=Gallus gallus GN=UG... [more]
UGDH_RAT3.469e-6966.84UDP-glucose 6-dehydrogenase OS=Rattus norvegicus G... [more]
UGDH_PONAB3.835e-6866.84UDP-glucose 6-dehydrogenase OS=Pongo abelii GN=UGD... [more]

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Properties
Property NameValue
Genbank descriptionC04035B05SK FlavFr1 Citrus clementina cDNA clone C04035B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293746 ID=CX293746; Name=CX293746; organism=Citrus clementina; type=EST; length=651bp
GAGGGTTTTGTTTTTGAGAAATCGAAGCTCACTGAGGTTATCTTGATTAG
TAAAGGAAAATGGTGAAGATCTGCTGCATCGGTGCTGGGTATGTTGGGGG
GCCGACAATGGCAGTCATTGCACTGAAGTGCCCATCCATTGAAGTGGCTG
TTGTTGATATCTCTGTGTCTCGGATCAATGCCTGGAACAGTGACCAGCTC
CCCATCTATGAGCCTGGACTTGATGGTGTGGTAAAGCAGTGCCGAGGGAA
GAACCTGTTCTTCAGCACCGATGTTGAGAAGCATGTCTCTGAGGCTGATA
TTGTCTTTGTTTCGGTCAATACCCCAACTAAAACTCAGGGTCTTGGTGCT
GGCAAAGCTGCAGATCTGACATACTGGGAGAGCGCTGCTCGTGTGATTGC
CGATGTGTCAAAGTCTGACAAAATTGTTGTTGAGAAATCAACAGTTCCTG
TAAAAACTGCTGAGGCAATTGAAAAAATTTTGACCCACAACAGCAAGGGA
ATCAAATTCCAGATCCTTTCAAACCCGGAGTTTCTTGCTGAGGGAACTGC
AATACAGGATCTTTTTAACCCAGATCGGGTCCTTATCGGTGGTAGAGAAA
CGCCAGAAGGCCAGAAAGCCGTCAAAGCCTTGAAGGATGTGTATGCACAC
T
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