CX293751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP1G_DICDI (AP-1 complex subunit gamma OS=Dictyostelium discoideum GN=ap1g1 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.576e-43 Identity = 80/127 (62.99%), Postives = 106/127 (83.46%), Query Frame = 1 Query: 268 TRLRDMIRSIRACKTAAEERAVVRKECAAIRAAINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICS 648 ++LRD+I+++R+CKTAAEER+ + KE A IR A+ E D + R RN+AKL++IHMLGYPT FGQMECLK I S + +KRIGYLGLMLLLDE+QEVL+L TN ++ D+ ++NQ+IVG++LCA GNICS Sbjct: 3 SKLRDLIKTVRSCKTAAEERSQIAKESALIRTAMKEEDLESRQRNVAKLLYIHMLGYPTQFGQMECLKLIVSPSYADKRIGYLGLMLLLDEKQEVLLLATNCIRGDIMNSNQFIVGVSLCAFGNICS 129
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP1G1_PONAB (AP-1 complex subunit gamma-1 OS=Pongo abelii GN=AP1G1 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.794e-41 Identity = 78/122 (63.93%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 271 RLRDMIRSIRACKTAAEERAVVRKECAAIRAAINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALG 636 RLR++IR+IR +T AEER +++KECAAIR++ E D YR RN+AKL+++HMLGYP HFGQ+ECLK IAS F +KRIGYLG MLLLDERQ+V +L+TN +K DLNH+ Q++ GLALC LG Sbjct: 6 RLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLG 127
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP1G1_MOUSE (AP-1 complex subunit gamma-1 OS=Mus musculus GN=Ap1g1 PE=1 SV=3) HSP 1 Score: 169.088 bits (427), Expect = 1.794e-41 Identity = 78/122 (63.93%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 271 RLRDMIRSIRACKTAAEERAVVRKECAAIRAAINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALG 636 RLR++IR+IR +T AEER +++KECAAIR++ E D YR RN+AKL+++HMLGYP HFGQ+ECLK IAS F +KRIGYLG MLLLDERQ+V +L+TN +K DLNH+ Q++ GLALC LG Sbjct: 6 RLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLG 127
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP1G1_HUMAN (AP-1 complex subunit gamma-1 OS=Homo sapiens GN=AP1G1 PE=1 SV=5) HSP 1 Score: 169.088 bits (427), Expect = 1.794e-41 Identity = 78/122 (63.93%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 271 RLRDMIRSIRACKTAAEERAVVRKECAAIRAAINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALG 636 RLR++IR+IR +T AEER +++KECAAIR++ E D YR RN+AKL+++HMLGYP HFGQ+ECLK IAS F +KRIGYLG MLLLDERQ+V +L+TN +K DLNH+ Q++ GLALC LG Sbjct: 6 RLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLG 127
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP1G1_USTMA (AP-1 complex subunit gamma-1 OS=Ustilago maydis GN=APL4 PE=3 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39 Identity = 73/125 (58.40%), Postives = 97/125 (77.60%), Query Frame = 1 Query: 274 LRDMIRSIRACKTAAEERAVVRKECAAIRAAINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICS 648 L+ +I++IR+CKT A+ER++++KE A+IR A + D RH N+AKL++IHMLGYP HFGQ+ECLK +A+ F +KR+GYLG+MLLLDE EVL LVTN LK D+ H+N Y+ GLALC NI S Sbjct: 9 LKALIKAIRSCKTLADERSLIQKESASIRTAFKDEDPFARHNNIAKLLYIHMLGYPAHFGQIECLKLVATPRFTDKRLGYLGIMLLLDENTEVLTLVTNGLKNDMEHSNMYVCGLALCTFANIAS 133
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP1G2_MOUSE (AP-1 complex subunit gamma-like 2 OS=Mus musculus GN=Ap1g2 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.681e-37 Identity = 74/126 (58.73%), Postives = 94/126 (74.60%), Query Frame = 1 Query: 271 RLRDMIRSIRACKTAAEERAVVRKECAAIRAAINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICS 648 RL+D+I IR +T A+ER V++KECA IRA+ + D RHR LAKL+++HMLGYP HFGQMECLK IAS F +KR+GYLG MLLLDER + +L+TNS+K DL+ NQ + GLALC L + S Sbjct: 7 RLQDLIEEIRGAETQAQEREVIQKECAQIRASFRDGDPLQRHRQLAKLLYVHMLGYPAHFGQMECLKLIASPRFTDKRVGYLGAMLLLDERHDSHLLITNSIKNDLSQGNQPVQGLALCTLSTMGS 132
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP1G2_HUMAN (AP-1 complex subunit gamma-like 2 OS=Homo sapiens GN=AP1G2 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 73/126 (57.94%), Postives = 95/126 (75.40%), Query Frame = 1 Query: 271 RLRDMIRSIRACKTAAEERAVVRKECAAIRAAINENDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICS 648 +L+D+I IR KT A+ER V++KECA IRA+ + D +RHR LAKL+++HMLGYP HFGQMECLK IAS+ F +KR+GYLG MLLLDER + +L+TNS+K DL+ Q + GLALC L + S Sbjct: 7 KLQDLIEEIRGAKTQAQEREVIQKECAHIRASFRDGDPVHRHRQLAKLLYVHMLGYPAHFGQMECLKLIASSRFTDKRVGYLGAMLLLDERHDAHLLITNSIKNDLSQGIQPVQGLALCTLSTMGS 132
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP1G1_SCHPO (AP-1 complex subunit gamma-1 OS=Schizosaccharomyces pombe GN=apl4 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.391e-32 Identity = 72/140 (51.43%), Postives = 97/140 (69.29%), Query Frame = 1 Query: 229 FTTDPIMNPFSSGTRLRDMIRSIRACKTAAEERAVVRKECAAIRAAINE--NDQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNI 642 FT P +P S L+ I+++RA KT AEE + KE A IR I + ND R +N+AKL+++ +LG PTHFGQ+ECLK ++S+ F +KR+GYL MLLLDE QEVL L+TNSL+ DL +++IVGLAL A GN+ Sbjct: 20 FTNSPKTHPKMSS--LKSFIKAVRASKTTAEEHTTILKESAQIRKNIRQGSNDMRMRRKNVAKLLYLFLLGEPTHFGQIECLKLLSSSRFMDKRLGYLAAMLLLDENQEVLTLLTNSLQNDLKSRDKFIVGLALSAFGNV 157
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP1G1_YEAST (AP-1 complex subunit gamma-1 OS=Saccharomyces cerevisiae GN=APL4 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.090e-26 Identity = 58/130 (44.62%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 265 GTRLRDMIRSIRACKTAAEERAVVRKECAAIRAAINENDQDYRHR--NLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNICS 648 G+ LR I+ +R KT A+ERA++ K+ A IR + ++ + R N+ KL+++++LG THFGQ+E + IAS F +KR+GYL LLLDE +++L L+TN L DL+H N+Y V LAL +LG + S Sbjct: 2 GSSLRSFIKDVRGAKTLADERAIITKQSAKIRTKLRDDHLPHEKRRVNIQKLLYLYILGEKTHFGQVESINLIASDDFVDKRLGYLAATLLLDESEDLLTLLTNMLNNDLHHPNKYAVSLALTSLGFLSS 131
BLAST of CX293751 vs. ExPASy Swiss-Prot
Match: AP2A2_DICDI (AP-2 complex subunit alpha-2 OS=Dictyostelium discoideum GN=ap2a1-1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.256e-17 Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 244 IMNPFSSGTRLRDM---IRSIRACKTAAEERAVVRKECAAIRAAINEN---DQDYRHRNLAKLMFIHMLGYPTHFGQMECLKSIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQYIVGLALCALGNI 642 + NP + T +R + I +R + E V KE A IR EN D R + + KL++++MLGY FG ME + ++S F EK+IGY+ L +LL+E+ E+L L+ NS K+DL + Y LAL A+ NI Sbjct: 5 VTNPNIAKTSMRGLTNFISDLRNSPSKENEEKRVTKEMAHIRKEFKENKNIDGYQRRKYVCKLVYMYMLGYELDFGHMEAVTLLSSTKFSEKQIGYIALGILLNEQHEMLPLIINSFKEDLLARSDYFQSLALAAICNI 143 The following BLAST results are available for this feature:
BLAST of CX293751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293751 ID=CX293751; Name=CX293751; organism=Citrus clementina; type=EST; length=648bpback to top |