CX293755

Overview
NameCX293755
Unique NameCX293755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length510
Libraries
Library NameType
FlavFr1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX293755 vs. ExPASy Swiss-Prot
Match: NDH2_YEAST (External NADH-ubiquinone oxidoreductase 2, mitochondrial OS=Saccharomyces cerevisiae GN=NDE2 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 2 
Query:   26 KDINLG----DQFVYKHLGSMATVGRYKALVDLRQSKDEKGISLAGFLSWLIWRSAYLTRVLSWRNRFYVAVNWATTFVFGRDIS 268
            K++NL     D+F YKH+G++A +G   A+ DL     +    L G  ++L W+SAYL   LS RNR  +A++W   +  GRD S
Sbjct:  462 KEVNLRKSKLDKFNYKHMGALAYIGSETAIADLHMG--DSSYQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKVYFLGRDSS 544
The following BLAST results are available for this feature:
BLAST of CX293755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NDH2_YEAST9.566e-1138.82External NADH-ubiquinone oxidoreductase 2, mitocho... [more]
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Properties
Property NameValue
Genbank descriptionC04035C04SK FlavFr1 Citrus clementina cDNA clone C04035C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293755 ID=CX293755; Name=CX293755; organism=Citrus clementina; type=EST; length=510bp
AGATGGAGGCAAGGCACTAAGCGCAAAAGACATCAATCTAGGAGACCAAT
TTGTGTACAAGCATCTTGGAAGCATGGCAACAGTTGGTCGCTACAAGGCA
TTGGTGGATCTACGCCAGTCTAAGGATGAGAAGGGGATATCACTTGCTGG
ATTTCTGAGCTGGCTAATTTGGCGCTCAGCTTATCTAACGCGAGTTTTGA
GTTGGAGGAATAGGTTTTATGTTGCAGTGAACTGGGCTACCACGTTCGTA
TTTGGAAGAGACATCTCCAGGATATGATAGGTCACGGGTTGATGAAAACA
AGGTCATAATATATCATTGGATTTGCTTCGTGTTGGATTTGATTCATATA
TTATAGATTGTAAGTTGGATTTTGCAGACCAATTCTTGTAACGGATAAAA
ATGTCTTCTTATACGAAGCAGTTTCATTTTTTGGAAAATATTACTTTGTA
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCGGGGGGGGGCCGGGAC
CCCATTTCCC
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