CX293831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.987e-35 Identity = 86/140 (61.43%), Postives = 92/140 (65.71%), Query Frame = 1 Query: 34 SMVSTNCAQFSGLRRS--------SPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKD 429 S VST QFSGLRRS S SF Q+V+ VVAMA S KFFVGGNWKCNGTKESITKLVSDLN A LE FVYIDQVK+SLT R+EI+AQN W+GKGGAFTGEISVEQLKD Sbjct: 17 SAVST---QFSGLRRSFLKLENSVSTQSSFFQNVDSHLRLSSSSRRCPRG-VVAMAGSGKFFVGGNWKCNGTKESITKLVSDLNSATLEADVDVVVAPPFVYIDQVKSSLTGRVEISAQNCWIGKGGAFTGEISVEQLKD 152
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.362e-34 Identity = 84/145 (57.93%), Postives = 90/145 (62.07%), Query Frame = 1 Query: 28 MASMVSTNCAQFSGLRRSSPT---------QSFSQHVNXXXXXXXXXXXXXXXX--VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKD 429 MA+ T FSGLRR SP QSF VN VVAMA S KFFVGGNWKCNGTK+SI KL+SDLN A LE FVYIDQVK+SLTDRI+I+ QNSWVGKGGAFTGEISVEQLKD Sbjct: 1 MAATSLTAPPSFSGLRRISPKLDAAAVSSHQSFFHRVNSSTRLVSSSSSSHRSPRGVVAMAGSGKFFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISGQNSWVGKGGAFTGEISVEQLKD 145
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.356e-33 Identity = 74/123 (60.16%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 61 FSGLRRSSPTQSFSQHVNXXXXXXXXXXXXXXXXVVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKD 429 +SGLRRS P S VVAMA + KFFVGGNWKCNGTK+ I+KLVSDLN AKLE F+Y+DQVK+SLTDRIEI+ QNSWV KGGAFTGEISVEQLKD Sbjct: 22 YSGLRRSCPKLDQSHSSLFQHLSLSSSSRKASRAVVAMAGTGKFFVGGNWKCNGTKDLISKLVSDLNSAKLEPDVDVVVAPPFLYLDQVKSSLTDRIEISGQNSWVAKGGAFTGEISVEQLKD 144
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.410e-31 Identity = 65/89 (73.03%), Postives = 73/89 (82.02%), Query Frame = 1 Query: 163 VVAMASSNKFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKD 429 +VAMA S KFFVGGNWKCNGTKESI+KLVSDLN A LE F+YIDQVK+SLTDRIE++AQN+W+GKGGAFTGEIS EQL D Sbjct: 40 LVAMAGSGKFFVGGNWKCNGTKESISKLVSDLNAATLESDVDVVVAPPFIYIDQVKSSLTDRIEVSAQNTWIGKGGAFTGEISAEQLVD 128
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIS_COPJA (Triosephosphate isomerase, cytosolic OS=Coptis japonica PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16 Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 187 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQL 423 KFFVGGNWKCNGT E + K+V+ LN+A++ E +V++ VKN L +AAQN WV KGGAFTGE+S E L Sbjct: 4 KFFVGGNWKCNGTSEEVKKIVTLLNEAEVPSEDVVEVVVSPPYVFLPFVKNLLRADFHVAAQNCWVKKGGAFTGEVSAEML 84
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.185e-16 Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 181 SNKFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQL 423 + KFFVGGNWKCNGT E + K+V+ LN+A++ + +V++ VK++L +AAQN WV KGGAFTGE+S E L Sbjct: 2 ARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEML 84
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIS_PETHY (Triosephosphate isomerase, cytosolic OS=Petunia hybrida GN=TPIP1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.868e-16 Identity = 40/81 (49.38%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 187 KFFVGGNWKCNGTKESITKLVSDLN--DAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQL 423 KFFVGGNWKCNGT E + K+++ LN D + +V++ VKN L +AAQN WV KGGAFTGE+S E L Sbjct: 4 KFFVGGNWKCNGTAEEVKKILATLNAADVPSQDVVEVVVSPPYVFLPLVKNELRPDFHVAAQNCWVKKGGAFTGEVSAEML 84
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 6.358e-16 Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 187 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXX--FVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQL 423 KFFVGGNWKCNGT + + K+V LN+ ++ +V++ VK+ L I++AAQN WV KGGAFTGE+S E L Sbjct: 4 KFFVGGNWKCNGTTDQVDKIVKILNEGQIASTDVVEVVVSPPYVFLPVVKSQLRPEIQVAAQNCWVKKGGAFTGEVSAEML 84
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 1.416e-15 Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 1 Query: 187 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQL 423 KFFVGGNWKCNGT + + K+V LN+ ++ +V++ VK+ L +AAQN WV KGGAFTGE+S E L Sbjct: 4 KFFVGGNWKCNGTTDQVEKIVKTLNEGQVPPSDVVEVVVSPPYVFLPVVKSQLRQEFHVAAQNCWVKKGGAFTGEVSAEML 84
BLAST of CX293831 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.850e-15 Identity = 38/81 (46.91%), Postives = 51/81 (62.96%), Query Frame = 1 Query: 187 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQL 423 KFFVGGNWKCNGT+ES++K+V LN+ + +V++ L I++AAQN WV KGGAFTGE+S + L Sbjct: 4 KFFVGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDENAELKHEIQVAAQNCWVKKGGAFTGEVSAQML 84 The following BLAST results are available for this feature:
BLAST of CX293831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293831 ID=CX293831; Name=CX293831; organism=Citrus clementina; type=EST; length=429bpback to top |