CX293845
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.434e-31 Identity = 79/150 (52.67%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 150 MDRQGHGGQPTSMGLVGSGAQVPYGTNPYQQNQMAGGPNPGPAVTSVGAIQSTSQPGGXXXXXXXXXXXXXXXXXXXXXXXXXXSFWANQYQEIEKVNDFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSWNHT 599 MD+Q HG SGA + YGTNPYQ N M+ T+ +QPG +FW NQ++EIEK DFKNHSLPLARIKKIMKAD DVRMISAEAPV+FARACEMFILELTLRSWNHT Sbjct: 1 MDQQDHGQ---------SGA-MNYGTNPYQTNPMS--------TTAATVAGGAAQPG------QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHT 126
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.675e-29 Identity = 71/136 (52.21%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 198 GSGAQVPYGTNPYQQNQMAGGPNPG--PAVTSVGAIQSTSQPGGXXXXXXXXXXXXXXXXXXXXXXXXXXSFWANQYQEIEKVNDFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSWNHT 599 G + + YG+NPYQ N M P PA + Q SFW Q++EIEK DFKNHSLPLARIKKIMKAD DVRMISAEAPV+FARACEMFILELTLRSWNHT Sbjct: 5 GQSSAMNYGSNPYQTNAMTTTPTGSDHPAYHQIHQQQQQQ------------------------LTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHT 116
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=1 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 6.874e-26 Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 3 Query: 405 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSWNHT 599 FWANQ QEIE DFKNH+LPLARIKKIMKAD DVRMISAEAPVIFA+ACEMFILELTLR+W HT Sbjct: 58 FWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHT 122
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.693e-24 Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 3 Query: 405 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSWNH 596 FW Q QEIE+VNDFKNH LPLARIKKIMKAD DVRMISAEAP++FA+ACE+FILELT+RSW H Sbjct: 60 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLH 123
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.693e-24 Identity = 52/64 (81.25%), Postives = 58/64 (90.62%), Query Frame = 3 Query: 405 FWANQYQEIEKVNDFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSWNH 596 FW Q QEIE+VNDFKNH LPLARIKKIMKAD DVRMISAEAP++FA+ACE+FILELT+RSW H Sbjct: 47 FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLH 110
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: NFYC_DICDI (Nuclear transcription factor Y subunit gamma OS=Dictyostelium discoideum GN=nfyc-1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.614e-20 Identity = 43/66 (65.15%), Postives = 54/66 (81.82%), Query Frame = 3 Query: 402 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSWNHT 599 SFW++Q ++I K DFK H LPLARIKKIMK+D DV IS+EAP++FA+ACE+ ILE+T RSW HT Sbjct: 251 SFWSSQLRDIHKTEDFKTHELPLARIKKIMKSDKDVNKISSEAPILFAKACEILILEMTHRSWVHT 316
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: NFYC6_ARATH (Nuclear transcription factor Y subunit C-6 OS=Arabidopsis thaliana GN=NFYC6 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.368e-18 Identity = 43/63 (68.25%), Postives = 53/63 (84.13%), Query Frame = 3 Query: 402 SFWANQYQEIEKVNDFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSW 590 ++W Q +E V+DFKN LPLARIKKIMKAD DV M+SAEAP+IFA+ACEMFI++LT+RSW Sbjct: 38 NYWIEQ---METVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSW 97
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: HAP5_YEAST (Transcriptional activator HAP5 OS=Saccharomyces cerevisiae GN=HAP5 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.832e-17 Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 3 Query: 405 FWANQYQEIEKVN--------DFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSW 590 +W EIE N DFK+HSLP ARI+K+MK D DV+MISAEAP+IFA+ACE+FI ELT+R+W Sbjct: 133 YWQELINEIESTNEPGSEHQDDFKSHSLPFARIRKVMKTDEDVKMISAEAPIIFAKACEIFITELTMRAW 202
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: NFYC_RAT (Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus GN=Nfyc PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.216e-16 Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 3 Query: 402 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSWNHT 599 SFW +EI V DF+ LPLARIKKIMK D DV+MISAEAPV+FA+A ++FI ELTLR+W HT Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHT 88
BLAST of CX293845 vs. ExPASy Swiss-Prot
Match: NFYC_PONAB (Nuclear transcription factor Y subunit gamma OS=Pongo abelii GN=NFYC PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.216e-16 Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 3 Query: 402 SFWANQYQEIEK--VNDFKNHSLPLARIKKIMKADXDVRMISAEAPVIFARACEMFILELTLRSWNHT 599 SFW +EI V DF+ LPLARIKKIMK D DV+MISAEAPV+FA+A ++FI ELTLR+W HT Sbjct: 21 SFWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHT 88 The following BLAST results are available for this feature:
BLAST of CX293845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293845 ID=CX293845; Name=CX293845; organism=Citrus clementina; type=EST; length=599bpback to top |