CX293851

Overview
NameCX293851
Unique NameCX293851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length471
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C42_ARATH (Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.436e-63
Identity = 62/89 (69.66%), Postives = 77/89 (86.52%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPNDS 268
            EHNAN E+IR ELK+LHP DPQIV+ +HGVWRVKGIIQVSRSIGD+YMK  ++N+EPI+ KFR+ EPM  P+++A P+I+ HPLHPNDS
Sbjct:  195 EHNANNEDIRWELKDLHPDDPQIVVFRHGVWRVKGIIQVSRSIGDMYMKRPEFNKEPISQKFRIAEPMKRPLMSATPTILSHPLHPNDS 283          

HSP 2 Score: 120.939 bits (302), Expect = 1.436e-63
Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 3
Query:  270 LIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            LIFASDGLWEHL+NEKAV+IV NHPR G AKRL+KAAL EAARKREMRY+DL+KIDK VRRHFHDDI
Sbjct:  285 LIFASDGLWEHLTNEKAVEIVHNHPRAGSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDI 351          
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C36_ORYSJ (Probable protein phosphatase 2C 36 OS=Oryza sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.868e-58
Identity = 62/88 (70.45%), Postives = 71/88 (80.68%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPND 265
            EHNAN E++RQEL   HP DPQIV LKHGVWRVKGIIQVSRS+GD Y+K++QYN E I  KFRLPEP + PIL+ANPSII   L P+D
Sbjct:  200 EHNANEEDVRQELMAQHPDDPQIVALKHGVWRVKGIIQVSRSLGDAYLKHSQYNTEQIKPKFRLPEPFSRPILSANPSIIARCLQPSD 287          

HSP 2 Score: 114.005 bits (284), Expect = 2.868e-58
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 3
Query:  270 LIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            +IFASDGLWEHLSN++AV+IV NH R G A+RL+KAAL EAARKREMRY+DL KIDK VRRHFHDDI
Sbjct:  290 IIFASDGLWEHLSNQQAVEIVHNHQRAGSARRLIKAALHEAARKREMRYSDLMKIDKKVRRHFHDDI 356          
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C28_ORYSJ (Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.080e-57
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPND 265
            EHNA +EE+RQEL+  HP DPQIV+LKH VWRVKG+IQ+SRSIGD+Y+K  +YNREP++ KFRL E    PIL++ P+I VH + PND
Sbjct:  193 EHNACYEEVRQELQASHPDDPQIVVLKHNVWRVKGLIQISRSIGDVYLKRPEYNREPLHSKFRLRETFKRPILSSEPAIAVHQIQPND 280          

HSP 2 Score: 115.161 bits (287), Expect = 1.080e-57
Identity = 53/67 (79.10%), Postives = 64/67 (95.52%), Query Frame = 3
Query:  270 LIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            +IFASDGLWEHLSN++AVD+VQN+PR GIA+RLVK A+QEAA+KREMRY+DL+KID+ VRRHFHDDI
Sbjct:  283 VIFASDGLWEHLSNQEAVDLVQNNPRNGIARRLVKVAMQEAAKKREMRYSDLKKIDRGVRRHFHDDI 349          
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C64_ARATH (Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.408e-57
Identity = 56/93 (60.22%), Postives = 72/93 (77.42%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPNDSPYIC 280
            EHNA+ E +R+EL+ LHP  P IV+LKH VWRVKGIIQVSRSIGD+Y+K +++NREP+  KFRL  P + P+L+A P+I VH L P+D   IC
Sbjct:  192 EHNASIESVRRELQALHPDHPDIVVLKHNVWRVKGIIQVSRSIGDVYLKRSEFNREPLYAKFRLRSPFSKPLLSAEPAITVHTLEPHDQFIIC 284          

HSP 2 Score: 117.087 bits (292), Expect = 1.408e-57
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 3
Query:  270 LIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            +I ASDGLWEH+SN++AVDIVQNHPR GIAKRLVK ALQEAA+KREMRY+DL+KID+ VRRHFHDDI
Sbjct:  282 IICASDGLWEHMSNQEAVDIVQNHPRNGIAKRLVKVALQEAAKKREMRYSDLKKIDRGVRRHFHDDI 348          
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C38_ARATH (Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 9.017e-57
Identity = 58/88 (65.91%), Postives = 72/88 (81.82%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPND 265
            EHNA+ E +R+EL+ LHP+DPQIV+LKH VWRVKGIIQVSRSIGD Y+K A++NREP+  KFR+PE  + PIL A P+I VH +HP D
Sbjct:  194 EHNASLESVREELRSLHPNDPQIVVLKHKVWRVKGIIQVSRSIGDAYLKKAEFNREPLLAKFRVPEVFHKPILRAEPAITVHKIHPED 281          

HSP 2 Score: 108.997 bits (271), Expect = 9.017e-57
Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 3
Query:  270 LIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            LIFASDGLWEHLSN++AVDIV   PR GIA++L+K AL+EAA+KREMRY+DL+KID+ VRRHFHDDI
Sbjct:  284 LIFASDGLWEHLSNQEAVDIVNTCPRNGIARKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDI 350          
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C72_ORYSJ (Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.279e-55
Identity = 52/88 (59.09%), Postives = 70/88 (79.55%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPND 265
            EHNA+FEE+R+EL+  HP DP IV+LKH VWRVKGIIQ++RSIGD+Y+K  ++NREP++ KFRL E    P+L++ P+I+VH L   D
Sbjct:  194 EHNASFEEVRRELQAAHPDDPHIVVLKHNVWRVKGIIQITRSIGDVYLKKPEFNREPLHSKFRLQETFRRPLLSSEPAIVVHQLQTTD 281          

HSP 2 Score: 114.005 bits (284), Expect = 1.279e-55
Identity = 53/74 (71.62%), Postives = 67/74 (90.54%), Query Frame = 3
Query:  249 LSTQMILLIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            L T    +IFASDGLWEH+SN++AVD+VQ++PR GIA+RLVKAA+Q+AA+KREMRY+DL+KID+ VRRHFHDDI
Sbjct:  277 LQTTDQFIIFASDGLWEHISNQEAVDLVQHNPRNGIARRLVKAAMQQAAKKREMRYSDLKKIDRGVRRHFHDDI 350          
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C79_ARATH (Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.279e-55
Identity = 54/88 (61.36%), Postives = 68/88 (77.27%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPND 265
            EHN + E +RQE+  LHP D  IV+LKH VWRVKGIIQVSRSIGD+Y+K +++N+EP+  K+RL EPM  PIL+  PSI VH L P+D
Sbjct:  193 EHNVSIESVRQEMHSLHPDDSHIVVLKHNVWRVKGIIQVSRSIGDVYLKKSEFNKEPLYTKYRLREPMKRPILSWEPSITVHDLQPDD 280          

HSP 2 Score: 115.546 bits (288), Expect = 1.279e-55
Identity = 55/67 (82.09%), Postives = 63/67 (94.03%), Query Frame = 3
Query:  270 LIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            LIFASDGLWE LSN++AV+IVQNHPR GIA+RLVKAALQEAA+KREMRY+DL KI++ VRRHFHDDI
Sbjct:  283 LIFASDGLWEQLSNQEAVEIVQNHPRNGIARRLVKAALQEAAKKREMRYSDLNKIERGVRRHFHDDI 349          
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C48_ARATH (Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 3.694e-55
Identity = 55/88 (62.50%), Postives = 69/88 (78.41%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPND 265
            EHNA+ E +R+EL+ LHP DP IV+LKH VWRVKGIIQVSRSIGD Y+K A++N+EP+  KFR+PE    PI+ A P+I VH +HP D
Sbjct:  195 EHNASIESVREELRLLHPDDPNIVVLKHKVWRVKGIIQVSRSIGDAYLKRAEFNQEPLLPKFRVPERFEKPIMRAEPTITVHKIHPED 282          

HSP 2 Score: 110.923 bits (276), Expect = 3.694e-55
Identity = 51/67 (76.12%), Postives = 63/67 (94.03%), Query Frame = 3
Query:  270 LIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            LIFASDGLWEHLSN++AVDIV + PR G+A++LVKAALQEAA+KREMRY+DL+KI++ +RRHFHDDI
Sbjct:  285 LIFASDGLWEHLSNQEAVDIVNSCPRNGVARKLVKAALQEAAKKREMRYSDLEKIERGIRRHFHDDI 351          
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C60_ORYSJ (Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.898e-54
Identity = 52/88 (59.09%), Postives = 68/88 (77.27%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPND 265
            EHN + E +R+EL+ +HP D  IV+LKH VWRVKG+IQV RSIGD Y+K +++NREP+  KFRL EP + PIL++ PSI V PL P+D
Sbjct:  192 EHNVSIESVRKELQSMHPEDRHIVVLKHNVWRVKGLIQVCRSIGDAYLKRSEFNREPLYAKFRLREPFHKPILSSEPSISVQPLQPHD 279          

HSP 2 Score: 110.923 bits (276), Expect = 8.898e-54
Identity = 52/67 (77.61%), Postives = 62/67 (92.54%), Query Frame = 3
Query:  270 LIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            LIFASDGLWEHL+N++AVDIV + PR G A+RL+KAALQEAA+KREMRY+DL+KID+ VRRHFHDDI
Sbjct:  282 LIFASDGLWEHLTNQEAVDIVHSSPRNGSARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDI 348          
BLAST of CX293851 vs. ExPASy Swiss-Prot
Match: P2C46_ARATH (Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.570e-53
Identity = 54/67 (80.60%), Postives = 63/67 (94.03%), Query Frame = 3
Query:  270 LIFASDGLWEHLSNEKAVDIVQNHPRVGIAKRLVKAALQEAARKREMRYADLQKIDKMVRRHFHDDI 470
            LIFASDGLWE +SN++AVDIVQNHPR GIA+RLVK ALQEAA+KREMRY+DL+KI++ VRRHFHDDI
Sbjct:  280 LIFASDGLWEQMSNQEAVDIVQNHPRNGIARRLVKMALQEAAKKREMRYSDLKKIERGVRRHFHDDI 346          

HSP 2 Score: 114.005 bits (284), Expect = 2.570e-53
Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 2
Query:    2 EHNANFEEIRQELKELHPHDPQIVILKHGVWRVKGIIQVSRSIGDLYMKNAQYNREPINGKFRLPEPMNMPILTANPSIIVHPLHPND 265
            EHN + E +RQE+  LHP D  IV+LKH VWRVKG+IQ+SRSIGD+Y+K A++N+EP+  K+R+ EP   PIL+  P+I  H + P D
Sbjct:  190 EHNVSIESVRQEMHSLHPDDSHIVMLKHNVWRVKGLIQISRSIGDVYLKKAEFNKEPLYTKYRIREPFKRPILSGEPTITEHEIQPQD 277          
The following BLAST results are available for this feature:
BLAST of CX293851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
P2C42_ARATH1.436e-6369.66Probable protein phosphatase 2C 42 OS=Arabidopsis ... [more]
P2C36_ORYSJ2.868e-5870.45Probable protein phosphatase 2C 36 OS=Oryza sativa... [more]
P2C28_ORYSJ1.080e-5763.64Probable protein phosphatase 2C 28 OS=Oryza sativa... [more]
P2C64_ARATH1.408e-5760.22Probable protein phosphatase 2C 64 OS=Arabidopsis ... [more]
P2C38_ARATH9.017e-5765.91Probable protein phosphatase 2C 38 OS=Arabidopsis ... [more]
P2C72_ORYSJ1.279e-5559.09Probable protein phosphatase 2C 72 OS=Oryza sativa... [more]
P2C79_ARATH1.279e-5561.36Probable protein phosphatase 2C 79 OS=Arabidopsis ... [more]
P2C48_ARATH3.694e-5562.50Probable protein phosphatase 2C 48 OS=Arabidopsis ... [more]
P2C60_ORYSJ8.898e-5459.09Probable protein phosphatase 2C 60 OS=Oryza sativa... [more]
P2C46_ARATH2.570e-5380.60Probable protein phosphatase 2C 46 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05001F04SK FlavSen1 Citrus clementina cDNA clone C05001F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX293851 ID=CX293851; Name=CX293851; organism=Citrus clementina; type=EST; length=471bp
GGAACACAATGCAAACTTTGAGGAGATCAGGCAGGAACTTAAGGAATTAC
ACCCACATGATCCTCAGATCGTAATCCTCAAGCATGGAGTTTGGAGAGTG
AAGGGCATTATTCAGGTTTCTAGGTCTATTGGTGATTTATATATGAAGAA
TGCACAGTATAACAGGGAACCAATAAATGGAAAATTCAGGCTCCCAGAAC
CAATGAACATGCCTATCTTGACTGCCAATCCATCTATAATTGTTCATCCT
CTCCACCCAAATGATTCTCCTTATATTTGCATCCGATGGTCTATGGGAAC
ACTTGAGTAATGAAAAGGCTGTGGATATTGTCCAAAATCATCCCCGTGTG
GGAATTGCCAAAAGGCTTGTCAAGGCTGCACTCCAAGAAGCAGCAAGAAA
ACGAGAGATGAGATATGCAGATCTTCAAAAGATTGACAAAATGGTTCGGC
GTCATTTTCATGATGATATAA
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