CX294059

Overview
NameCX294059
Unique NameCX294059
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length535
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294059 vs. ExPASy Swiss-Prot
Match: GSOX2_ARATH (Flavin-containing monooxygenase FMO GS-OX2 OS=Arabidopsis thaliana GN=FMOGS-OX2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.264e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 1
Query:   37 ASVLSGRIVLPSQDQMMEDVKAFYSKLEASGKPKRYTHIMDYPQLIEYTDWLAAQCNCQGYE*WRKQMAYSAFKNAFITRPGTYRDEWDDEHLVAEANKDFIK 345
            A+VLS R+ LP++D+MMED+ A+Y+ L+A G PKRYTH +   Q  EY +W+A +C C   E WR Q     ++   ++ P TYRDEWDD  L+ EA +DF +
Sbjct:  345 AAVLSRRVTLPTEDKMMEDISAWYASLDAVGIPKRYTHKLGKIQ-SEYLNWVAEECGCPLVEHWRNQQIVRGYQR-LVSHPETYRDEWDDNDLMEEAYEDFAR 445          
BLAST of CX294059 vs. ExPASy Swiss-Prot
Match: GSOX1_ARATH (Flavin-containing monooxygenase FMO GS-OX1 OS=Arabidopsis thaliana GN=FMOGS-OX1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.978e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 1
Query:   37 ASVLSGRIVLPSQDQMMEDVKAFYSKLEASGKPKRYTHIMDYPQLIEYTDWLAAQCNCQGYE*WRKQMAYSAFKNAFITRPGTYRDEWDDEHLVAEANKDFIK 345
            A+VLSGR++LPSQD+MMED+  +Y+ L+  G PKR+TH +      EY +W+A +C+C   E WR Q     F+   ++ P  YRDEWDD+ L+ EA KDF +
Sbjct:  345 AAVLSGRVILPSQDKMMEDIIEWYATLDVLGIPKRHTHKLGKIS-CEYLNWIAEECHCSPVENWRIQEVERGFQR-MVSHPEIYRDEWDDDDLMEEAYKDFAR 445          
BLAST of CX294059 vs. ExPASy Swiss-Prot
Match: GSOX5_ARATH (Flavin-containing monooxygenase FMO GS-OX5 OS=Arabidopsis thaliana GN=FMOGS-OX5 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.612e-20
Identity = 47/103 (45.63%), Postives = 69/103 (66.99%), Query Frame = 1
Query:   37 ASVLSGRIVLPSQDQMMEDVKAFYSKLEASGKPKRYTHIMDYPQLIEYTDWLAAQCNCQGYE*WRKQMAYSAFKNAFITRPGTYRDEWDDEHLVAEANKDFIK 345
            A+ LSGR+ LPS+++MMEDV A+Y+K EA G+PKRYTH +   Q ++Y +W+A Q      E WR Q     +     T+  T+RD+WDD+HL+ EA +DF++
Sbjct:  345 AAALSGRVTLPSEEKMMEDVTAYYAKREAFGQPKRYTHRLGGGQ-VDYLNWIAEQIGAPPGEQWRYQEINGGYYR-LATQSDTFRDKWDDDHLIVEAYEDFLR 445          
BLAST of CX294059 vs. ExPASy Swiss-Prot
Match: GSOX3_ARATH (Flavin-containing monooxygenase FMO GS-OX3 OS=Arabidopsis thaliana GN=FMOGS-OX3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.456e-20
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 1
Query:   37 ASVLSGRIVLPSQDQMMEDVKAFYSKLEASGKPKRYTHIMDYPQLIEYTDWLAAQCNCQGYE*WRKQMAYSAFKNAFITRPGTYRDEWDDEHLVAEANKDF 339
            A+VLSGR+ LPS D+MMED+ A+Y+ L+A G PKR+TH +   Q  EY +W+A +  C+  E WR Q     +    +  P TYRDEWDD+ L+ EA  DF
Sbjct:  346 AAVLSGRVTLPSTDKMMEDINAWYASLDALGIPKRHTHTIGRIQ-SEYLNWVAKESGCELVERWRGQEVDGGYLR-LVAHPETYRDEWDDDELIEEAYNDF 444          
BLAST of CX294059 vs. ExPASy Swiss-Prot
Match: GSOX4_ARATH (Flavin-containing monooxygenase FMO GS-OX4 OS=Arabidopsis thaliana GN=FMOGS-OX4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 1.872e-18
Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 1
Query:   37 ASVLSGRIVLPSQDQMMEDVKAFYSKLEASGKPKRYTHIMDYPQLIEYTDWLAAQCNCQGYE*WRKQMAYSAFKNAFITRPGTYRDEWDDEHLVAEANKDFIK 345
            A+VLSGR+ LPS D+MM+D+K  Y   EA G PKRYTH +   Q  EY DW+A  C     E WR Q     ++     +P T+RDEWDD+ L+ EA +DF +
Sbjct:  345 AAVLSGRVTLPSVDEMMDDLKLSYETQEALGIPKRYTHKLGKSQ-CEYLDWIADLCGFPHVEHWRDQEVTRGYQR-LGNQPETFRDEWDDDDLMEEAYEDFAR 445          
The following BLAST results are available for this feature:
BLAST of CX294059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GSOX2_ARATH5.264e-2146.60Flavin-containing monooxygenase FMO GS-OX2 OS=Arab... [more]
GSOX1_ARATH8.978e-2146.60Flavin-containing monooxygenase FMO GS-OX1 OS=Arab... [more]
GSOX5_ARATH2.612e-2045.63Flavin-containing monooxygenase FMO GS-OX5 OS=Arab... [more]
GSOX3_ARATH4.456e-2047.52Flavin-containing monooxygenase FMO GS-OX3 OS=Arab... [more]
GSOX4_ARATH1.872e-1846.60Flavin-containing monooxygenase FMO GS-OX4 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionC05005E03SK FlavRip1 Citrus clementina cDNA clone C05005E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294059 ID=CX294059; Name=CX294059; organism=Citrus clementina; type=EST; length=535bp
ATTCGGCACGAGGCCTCGTGCCGAATTCGGCACGAGGCCAGTGTTTTGTC
TGGTCGAATTGTGCTTCCTTCACAAGACCAGATGATGGAGGATGTTAAAG
CCTTTTACTCAAAGCTTGAAGCTTCTGGGAAACCTAAGCGATACACTCAT
ATCATGGATTACCCTCAATTAATTGAGTACACAGATTGGCTTGCTGCACA
GTGCAATTGTCAAGGCTATGAATAATGGAGAAAGCAAATGGCCTATTCAG
CTTTTAAAAACGCTTTTATTACTCGACCAGGGACATACCGCGATGAATGG
GACGATGAGCATCTGGTTGCTGAAGCCAACAAGGATTTCATCAAATATAC
GTCAAATAAATCAAAGTAACAATAGCCTATTTCTGCGTATGAATTCCATC
TGATACATTTTCTATACAATAGGCCCCCGGCTGTATGAGTAGTCCCCAAT
TCTTATTATTGTATCACACGTTAAATGCAACTAAATAATTTCAAATGTGC
AAAAGCTTTAGTGAAAGATTAGTTAATTTGGTCTA
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