CX294065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_PARUW (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) GN=ispG PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.718e-35 Identity = 81/186 (43.55%), Postives = 114/186 (61.29%), Query Frame = 1 Query: 25 DESYKELEILKDIDAAMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGSNXXXXXXXXXXXXXXXEAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRLP-DVGRLC 579 DE+ KE + + + +I+ N R+ +R+ FE+L +N LN+PVI + + +D ++ A E P D FLR SF++LQ R+R +KT+++SCPSCGRTLF+LQ+++ I+ +TSHLPGV IAIMGCIVNGPGEMADADFGYVG PG++ VG+ C Sbjct: 445 DETEKEWKEVISLKPQLIILSPSTN-----RLHYSRQFFEWLQQNQLNYPVILNFTYQG--ENEDTILLASMECGSLLCDGLGEGVWLEGP-YDILFLRQLSFSILQAARLRMSKTDFISCPSCGRTLFNLQDVTKRIQSRTSHLPGVKIAIMGCIVNGPGEMADADFGYVGSKPGKIDLYVGKEC 622
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans GN=ispG PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.078e-29 Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 1 Query: 301 QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 +D + + S++LLQG R+R TKTEY+SCPSCGRTLFDLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PG++ Sbjct: 540 KDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKV 625
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_LEPIC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ispG PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.078e-29 Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = 1 Query: 301 QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 +D + + S++LLQG R+R TKTEY+SCPSCGRTLFDLQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PG++ Sbjct: 540 KDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFDLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKV 625
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBL (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ispG PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.409e-29 Identity = 80/180 (44.44%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 28 ESYKEL-EILKDIDAAMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHR-DDLVIGAGSNXXXXXXXXXXXXXXXEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 ES+K L E L +I +L + E + R+L LS++ FP++ H F N D IG G + P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PG++ Sbjct: 456 ESFKGLPETLSEIGIKNVLFSIESKEI----LYDYRKLGSILSQHE--FPILLHGSFSNPEEALYDSAIGIGG----LLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKV 625
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_LEPBJ (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ispG PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.409e-29 Identity = 80/180 (44.44%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 28 ESYKEL-EILKDIDAAMILHDLPFNEDKIGRVQAARRLFEYLSENNLNFPVIHHIQFPNGIHR-DDLVIGAGSNXXXXXXXXXXXXXXXEAPG-QDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 ES+K L E L +I +L + E + R+L LS++ FP++ H F N D IG G + P +D + + S++LLQG R+R TKTEY+SCPSCGRTLF+LQE +A I+ +T HL GV IA+MGCIVNGPGEMADADFGYVG PG++ Sbjct: 456 ESFKGLPETLSEIGIKNVLFSIESKEI----LYDYRKLGSILSQHE--FPILLHGSFSNPEEALYDSAIGIGG----LLIDGIGDLIRIKTPKMKDIEEIFQLSYDLLQGTRLRLTKTEYISCPSCGRTLFNLQETTARIKSRTGHLKGVKIAVMGCIVNGPGEMADADFGYVGAGPGKV 625
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLMU (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia muridarum GN=ispG PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.241e-26 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 304 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 D R F++LQ +R+T EY+SCP CGRTLFDL E+S I+E+T HLP G+ IA+MGCIVNGPGEMADADFGYVG PG + Sbjct: 480 DLKLARTLGFSILQSANIRSTTVEYISCPGCGRTLFDLPEVSQRIKERTKHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMI 565
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_AKKM8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=ispG PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.539e-26 Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 1 Query: 331 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 FN+LQ R T+ +YVSCPSCGRTL+++QE +A IR+ T HL GV IA+MGCIVNGPGEMADADFGYVGGAP ++ Sbjct: 474 FNILQATGTRLTRADYVSCPSCGRTLYNIQEATARIRKATEHLKGVKIAVMGCIVNGPGEMADADFGYVGGAPNKI 549
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLCV (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila caviae GN=ispG PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.749e-25 Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 1 Query: 289 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 + P +R+ +F+ LQ +R KTEY+SCP CGRTLFDL E++ IREKT HL G+ IA+MGCIVNGPGEMAD+DFG+VG G + Sbjct: 481 DLPNVSLPTVREIAFSTLQSAGVRLVKTEYISCPGCGRTLFDLPEVTTRIREKTKHLVGLKIAVMGCIVNGPGEMADSDFGFVGSKTGMI 570
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_BACFN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=ispG PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.749e-25 Identity = 66/149 (44.30%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 115 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGSNXXXXXXXXXXXXXXXEAPGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 RV R L L+ L PVI + +DL I AG++ G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVNGPGEMADAD+GYVG G++ Sbjct: 431 RVGEHRALAHQLTVEGLQNPVIFFQHYAEDT-AEDLQIKAGADMGALIFDGLCDGIYLFNQGKLSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKI 578
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_BACFR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Bacteroides fragilis GN=ispG PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.590e-25 Identity = 65/149 (43.62%), Postives = 85/149 (57.05%), Query Frame = 1 Query: 115 RVQAARRLFEYLSENNLNFPVIHHIQFPNGIHRDDLVIGAGSNXXXXXXXXXXXXXXXEAPGQDFDFLRD-TSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 RV R L L+ L PVI + +DL + AG++ G+ + D T+F +LQ R+R +KTEY+SCP CGRTLF+LQ A ++E TSHL G+ I IMGCIVNGPGEMADAD+GYVG G++ Sbjct: 431 RVGEHRALAHQLTVEGLQNPVIFFQHYAEDT-AEDLQVKAGADMGALIFDGLCDGIYLFNQGKLSHAVIDATAFGILQAGRIRTSKTEYISCPGCGRTLFNLQSTIARVKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGKI 578 The following BLAST results are available for this feature:
BLAST of CX294065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294065 ID=CX294065; Name=CX294065; organism=Citrus clementina; type=EST; length=616bpback to top |