CX294142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294142 vs. ExPASy Swiss-Prot
Match: YERG_SCHPO (Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe GN=SPAC2F3.16 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.079e-29 Identity = 55/119 (46.22%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 143 GCKHYRRRCKIRAPRCNEIFDCRHCHNEAASMLRNPYDRHELVRQDVKQVICSVCDTEQPVAQVCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCGICRIGG--RENYFHWQRCGSC 493 GC HY R CK++ C+E + CRHCHN+A H L R V+ ++C +C QP AQ C C MG Y+C+ CK +DDD K +HCDDCGICRIG ++YFH + CG C Sbjct: 141 GCSHYMRNCKVQCFDCHEWYTCRHCHNDACD--------HVLERPAVENMLCMICSKVQPAAQYCKYCKNCMGRYYCNKCKLWDDDPNKSSYHCDDCGICRIGRGLGDDYFHCKTCGLC 251
BLAST of CX294142 vs. ExPASy Swiss-Prot
Match: ZN363_HUMAN (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.434e-26 Identity = 50/120 (41.67%), Postives = 73/120 (60.83%), Query Frame = 2 Query: 143 GCKHYRRRCKIRAPRCNEIFDCRHCHNEAASMLRNPYDRHELVRQDVKQVICSVCDTEQPVAQVCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCGICRIGGRENYFHWQRCGSCYSL 502 GC+HY R C ++AP C++++ CR CH+ + H+L R VK+V C C+ Q Q C C GEY+CDIC +D D K Q+HC++CGICRIG +E++FH +C C ++ Sbjct: 19 GCEHYDRGCLLKAPCCDKLYTCRLCHDNN--------EDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGICRIGPKEDFFHCLKCNLCLAM 128
BLAST of CX294142 vs. ExPASy Swiss-Prot
Match: ZN363_MOUSE (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.600e-25 Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 143 GCKHYRRRCKIRAPRCNEIFDCRHCHNEAASMLRNPYDRHELVRQDVKQVICSVCDTEQPVAQVCTNCGVNMGEYFCDICKFYDDDIEKGQFHCDDCGICRIGGRENYFHWQRCGSC 493 GC+HY R C ++AP C++++ CR CH+ + H+L R VK+V C C+ Q Q C +C GEY+C IC +D D K Q+HC+ CGICRIG +E++FH +C C Sbjct: 19 GCEHYDRACLLKAPCCDKLYTCRLCHDTN--------EDHQLDRFKVKEVQCINCEKLQHAQQTCEDCSTLFGEYYCSICHLFDKD--KRQYHCESCGICRIGPKEDFFHCLKCNLC 125 The following BLAST results are available for this feature:
BLAST of CX294142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294142 ID=CX294142; Name=CX294142; organism=Citrus clementina; type=EST; length=536bpback to top |