CX294226

Overview
NameCX294226
Unique NameCX294226
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14939 contig Ccv1_Contig14939:21..539. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294226 vs. ExPASy Swiss-Prot
Match: FHIT_DICDI (Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium discoideum GN=fhit PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.814e-28
Identity = 58/104 (55.77%), Postives = 75/104 (72.12%), Query Frame = 2
Query:  176 FGPYKIDAKEVFYSTPLSYAMVNLRPLLPG--LVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFE 481
            FGP+ I   E+F++T LS+A+VNL+P+LPG  LVC +R   R  DLT +E TDLWL+AQ++   +E +  G   TFAIQDG  AGQTV HVHIH++PRK  DFE
Sbjct:    6 FGPWLIRQSEIFFTTELSFALVNLKPVLPGHVLVCPKRIVPRVKDLTKEEFTDLWLSAQRISSVVEEHFNGDGITFAIQDGKNAGQTVEHVHIHIIPRKKFDFE 109          
BLAST of CX294226 vs. ExPASy Swiss-Prot
Match: FHIT_HUMAN (Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN=FHIT PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 4.416e-27
Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 2
Query:  170 FTFGPYKIDAKEVFYSTPLSYAMVNLRPLLPG--LVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEK 484
            F FG + I    VF  T LS+A+VN +P++PG  LVC  R  +RF DL  DE  DL+ T Q+VG  +E +  G+S TF++QDGPEAGQTV HVH+HVLPRKAGDF +
Sbjct:    3 FRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHR 109          
BLAST of CX294226 vs. ExPASy Swiss-Prot
Match: FHIT_BOVIN (Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=FHIT PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 9.839e-27
Identity = 56/107 (52.34%), Postives = 77/107 (71.96%), Query Frame = 2
Query:  170 FTFGPYKIDAKEVFYSTPLSYAMVNLRPLLPG--LVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEK 484
            F FG + I    VF  T LS+A+VN +P++PG  LVC  R  +RF D++ +E  DL+  AQ+VG  +E + +G+S TF++QDGPEAGQTV HVH+H+LPRKAGDF +
Sbjct:    3 FRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFRDMSPEEVADLFQAAQRVGTVVEKHFQGTSLTFSMQDGPEAGQTVKHVHVHILPRKAGDFHR 109          
BLAST of CX294226 vs. ExPASy Swiss-Prot
Match: FHIT_MOUSE (Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN=Fhit PE=2 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 1.285e-26
Identity = 58/107 (54.21%), Postives = 75/107 (70.09%), Query Frame = 2
Query:  170 FTFGPYKIDAKEVFYSTPLSYAMVNLRPLLPG--LVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEK 484
            F FG + I    VF  T LS+A+VN +P++PG  LVC  R  +RF DL  DE  DL+   Q+VG  +E + +G+S TF++QDGPEAGQTV HVH+HVLPRKAGDF +
Sbjct:    3 FRFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFRDLHPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHVLPRKAGDFPR 109          
BLAST of CX294226 vs. ExPASy Swiss-Prot
Match: FHIT_RAT (Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegicus GN=Fhit PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.883e-26
Identity = 55/107 (51.40%), Postives = 75/107 (70.09%), Query Frame = 2
Query:  170 FTFGPYKIDAKEVFYSTPLSYAMVNLRPLLPG--LVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEK 484
            F FG + I    VF  T LS+A+VN +P++PG  L+C  R  +RF DL  DE  DL+   Q+VG  +E + +G+S TF++QDGPEAGQTV HVH+H+LPRK+GDF +
Sbjct:    3 FKFGQHLIKPSVVFLKTELSFALVNRKPVVPGHVLMCPLRPVERFRDLRPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHILPRKSGDFRR 109          
BLAST of CX294226 vs. ExPASy Swiss-Prot
Match: NFT1_CAEEL (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.423e-25
Identity = 57/110 (51.82%), Postives = 72/110 (65.45%), Query Frame = 2
Query:  155 SSTTQFTFGPYKIDAKEVFYSTPLSYAMVNLRPLLPG--LVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDF 478
            S T    F  + I A  +FYSTP S+  VNL+P+  G  LV  +R   R  DLT  ET DL++ A+KV   LE +H  +STT  +QDG +AGQTVPHVHIH+LPR+AGDF
Sbjct:  294 SETGGLKFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDF 403          
BLAST of CX294226 vs. ExPASy Swiss-Prot
Match: APH1_SCHPO (Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Schizosaccharomyces pombe GN=aph1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.376e-20
Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = 2
Query:  167 QFTFGPYKIDAKEVFYSTPLSYAMVNLRPLLPG--LVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEK 484
            Q  F  + + + +VFY T LS A VNL+P+LPG  LV  +R   R  DLT  E TDL+ + +KV + +E     S++   IQDG +AGQTVPHVH+H++PRK  DF +
Sbjct:    4 QLYFSKFPVGS-QVFYRTKLSAAFVNLKPILPGHVLVIPQRAVPRLKDLTPSELTDLFTSVRKVQQVIEKVFSASASNIGIQDGVDAGQTVPHVHVHIIPRKKADFSE 110          
BLAST of CX294226 vs. ExPASy Swiss-Prot
Match: HNT2_YEAST (Hit family protein 2 OS=Saccharomyces cerevisiae GN=HNT2 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.021e-15
Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 2
Query:  200 KEVFYSTPLSYAMVNLRPLLPG---LVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPR 463
            ++VFY +  +YA+VNL+P++PG   +V  R      +DLT  E+ D + T Q + + ++  +K  S   AIQDGPEAGQ+VPH+H H++PR
Sbjct:   14 EQVFYKSKYTYALVNLKPIVPGHVLIVPLRTTVLNLSDLTMPESQDYFKTLQLIHRFIKWQYKADSINVAIQDGPEAGQSVPHLHTHIIPR 104          
BLAST of CX294226 vs. ExPASy Swiss-Prot
Match: NFT1_DROME (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Drosophila melanogaster GN=NitFhit PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.969e-15
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 2
Query:  191 IDAKEVFYSTPLSYAMVNLRPLLPG--LVCSRREAKRFADLTADETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDF 478
            +D + +FY +   +A  NLR ++ G  LV ++R   R   L   E  D++ T   V + LE  ++ +S T  +QDG +AGQTVPHVH H++PR+ GDF
Sbjct:  323 VDKRTIFYESEHCFAFTNLRCVVKGHVLVSTKRVTPRLCGLDCAEMADMFTTVCLVQRLLEKIYQTTSATVTVQDGAQAGQTVPHVHFHIMPRRLGDF 420          
The following BLAST results are available for this feature:
BLAST of CX294226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
FHIT_DICDI6.814e-2855.77Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium d... [more]
FHIT_HUMAN4.416e-2755.14Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN... [more]
FHIT_BOVIN9.839e-2752.34Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=F... [more]
FHIT_MOUSE1.285e-2654.21Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN... [more]
FHIT_RAT4.883e-2651.40Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegic... [more]
NFT1_CAEEL2.423e-2551.82Nitrilase and fragile histidine triad fusion prote... [more]
APH1_SCHPO1.376e-2046.30Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] ... [more]
HNT2_YEAST1.021e-1542.86Hit family protein 2 OS=Saccharomyces cerevisiae G... [more]
NFT1_DROME2.969e-1539.80Nitrilase and fragile histidine triad fusion prote... [more]
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Properties
Property NameValue
Genbank descriptionC05013G08SK AbsAOv1 Citrus clementina cDNA clone C05013G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294226 ID=CX294226; Name=CX294226; organism=Citrus clementina; type=EST; length=514bp
TTCCTGCAATCAAATGCAATCGCACCTACAACTACTGCTAGCAGGTGTTT
CTTCTTGGTACCTCTCGCATTCATTAAAACGGTGCCGCTCAATCTCCAGC
ACCACCATCACTCTCCCCAAGGCAAGTAAAATCAAATCGGCCTCAGCTCA
GATGTCGTCGACGACTCAGTTTACGTTCGGGCCTTACAAAATTGATGCGA
AGGAAGTGTTCTATAGCACTCCTCTCTCCTACGCCATGGTCAACCTGCGC
CCGTTGCTTCCTGGTCTTGTCTGCTCGAGGCGTGAAGCAAAGCGCTTTGC
TGATCTTACAGCTGATGAGACTACTGATTTATGGCTCACAGCCCAAAAGG
TTGGCAAACAGCTCGAAAGCTACCACAAGGGTTCATCAACAACATTTGCC
ATCCAAGATGGGCCTGAAGCTGGACAGACAGTACCCCATGTTCACATCCA
TGTTCTCCCGCGCAAAGCTGGTGACTTTGAAAAAATGATGAGATTTATGA
TGCATAGAGGTGAA
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