CX294236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294236 vs. ExPASy Swiss-Prot
Match: CNOT3_HUMAN (CCR4-NOT transcription complex subunit 3 OS=Homo sapiens GN=CNOT3 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 5.037e-36 Identity = 75/114 (65.79%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 168 MGASRKLQGEIDRVLNKVQEGVDVFDSIWNKVYDTHNANQKEKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEG 509 M RKLQGEIDR L KV EGV+ F+ IW K+++ NANQKEK+EADLKKEIKKLQR RD IKTW+ S+EIKDK+ L+D RKLIE +MERFK+ E+ETKTKA+SKEG Sbjct: 1 MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKR-------QLIDNRKLIETQMERFKVVERETKTKAYSKEG 107
BLAST of CX294236 vs. ExPASy Swiss-Prot
Match: CNOT3_MOUSE (CCR4-NOT transcription complex subunit 3 OS=Mus musculus GN=Cnot3 PE=1 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.466e-35 Identity = 74/114 (64.91%), Postives = 89/114 (78.07%), Query Frame = 3 Query: 168 MGASRKLQGEIDRVLNKVQEGVDVFDSIWNKVYDTHNANQKEKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEG 509 M RKLQGEIDR L KV EGV+ F+ IW K+++ NANQKEK+EADLKKEIKKLQR RD IKTW+ S+EIKDK+ L++ RKLIE +MERFK+ E+ETKTKA+SKEG Sbjct: 1 MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKR-------QLIENRKLIETQMERFKVVERETKTKAYSKEG 107
BLAST of CX294236 vs. ExPASy Swiss-Prot
Match: NOT5_YEAST (General negative regulator of transcription subunit 5 OS=Saccharomyces cerevisiae GN=NOT5 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 5.777e-24 Identity = 57/113 (50.44%), Postives = 78/113 (69.03%), Query Frame = 3 Query: 174 ASRKLQGEIDRVLNKVQEGVDVFDSIWNKVYDTH--NANQKEKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKE 506 + RKLQ +ID++L KV+EG++ FD I+ K T N++ +EK E+DLK+EIKKLQ++RD IKTW+ ++KDK + L+ R+LIE MERFK EK KTK FSKE Sbjct: 2 SQRKLQQDIDKLLKKVKEGIEDFDDIYEKFQSTDPSNSSHREKLESDLKREIKKLQKHRDQIKTWLSKEDVKDK------QSVLMTNRRLIENGMERFKSVEKLMKTKQFSKE 108
BLAST of CX294236 vs. ExPASy Swiss-Prot
Match: NOT3_YEAST (General negative regulator of transcription subunit 3 OS=Saccharomyces cerevisiae GN=NOT3 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 7.807e-21 Identity = 51/110 (46.36%), Postives = 76/110 (69.09%), Query Frame = 3 Query: 174 ASRKLQGEIDRVLNKVQEGVDVFDSIWNKVYD-THNANQKEKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFS 500 A RKLQ E+DRV K+ EG+++F+S + + T+N +QK+K E+DLK+E+KKLQR R+ IK+W S +IKDK +L+D R+ +E ME++K EK +K KA+S Sbjct: 2 AHRKLQQEVDRVFKKINEGLEIFNSYYERHESCTNNPSQKDKLESDLKREVKKLQRLREQIKSWQSSPDIKDK-------DSLLDYRRSVEIAMEKYKAVEKASKEKAYS 104
BLAST of CX294236 vs. ExPASy Swiss-Prot
Match: NOT3_SCHPO (General negative regulator of transcription subunit 3 OS=Schizosaccharomyces pombe GN=not3 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.332e-20 Identity = 50/95 (52.63%), Postives = 67/95 (70.53%), Query Frame = 3 Query: 225 EGVDVFDSIWNKVYDTHNANQKEKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEG 509 E + +FD ++ K+ +++ +QKEK E DLK +IKKLQR RD IKTW S++IKDKK AL++ R+LIE +ME FK E+E K KAFSKEG Sbjct: 9 EKIAIFDEVYEKLSASNSVSQKEKLEGDLKTQIKKLQRLRDQIKTWASSNDIKDKK-------ALLENRRLIEAKMEEFKAVEREMKIKAFSKEG 96 The following BLAST results are available for this feature:
BLAST of CX294236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294236 ID=CX294236; Name=CX294236; organism=Citrus clementina; type=EST; length=509bpback to top |