CX294237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294237 vs. ExPASy Swiss-Prot
Match: CNOT3_HUMAN (CCR4-NOT transcription complex subunit 3 OS=Homo sapiens GN=CNOT3 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.646e-35 Identity = 76/121 (62.81%), Postives = 90/121 (74.38%), Query Frame = 2 Query: 167 MGASRKLQGEIDRVLKKVHEGVDVFNSIWNKVYDTDYANQMEKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTYAFSKEGLGQQPKL 529 M RKLQGEIDR LKKV EGV+ F IW K+++ ANQ EK+EADLKKEIKKLQR RD IKTW+ S+EIKDK+ L+D RKLIE +MERFK+ E+ETKT A+SKEGLG K+ Sbjct: 1 MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKR-------QLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKV 114
BLAST of CX294237 vs. ExPASy Swiss-Prot
Match: CNOT3_MOUSE (CCR4-NOT transcription complex subunit 3 OS=Mus musculus GN=Cnot3 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.061e-34 Identity = 75/121 (61.98%), Postives = 90/121 (74.38%), Query Frame = 2 Query: 167 MGASRKLQGEIDRVLKKVHEGVDVFNSIWNKVYDTDYANQMEKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTYAFSKEGLGQQPKL 529 M RKLQGEIDR LKKV EGV+ F IW K+++ ANQ EK+EADLKKEIKKLQR RD IKTW+ S+EIKDK+ L++ RKLIE +MERFK+ E+ETKT A+SKEGLG K+ Sbjct: 1 MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKR-------QLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKV 114
BLAST of CX294237 vs. ExPASy Swiss-Prot
Match: NOT5_YEAST (General negative regulator of transcription subunit 5 OS=Saccharomyces cerevisiae GN=NOT5 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.451e-23 Identity = 58/115 (50.43%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 173 ASRKLQGEIDRVLKKVHEGVDVFNSIWNKVYDTDYANQM--EKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTYAFSKEGL 511 + RKLQ +ID++LKKV EG++ F+ I+ K TD +N EK E+DLK+EIKKLQ++RD IKTW+ ++KDK + L+ R+LIE MERFK EK KT FSKE L Sbjct: 2 SQRKLQQDIDKLLKKVKEGIEDFDDIYEKFQSTDPSNSSHREKLESDLKREIKKLQKHRDQIKTWLSKEDVKDK------QSVLMTNRRLIENGMERFKSVEKLMKTKQFSKEAL 110
BLAST of CX294237 vs. ExPASy Swiss-Prot
Match: NOT3_YEAST (General negative regulator of transcription subunit 3 OS=Saccharomyces cerevisiae GN=NOT3 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 7.380e-20 Identity = 52/120 (43.33%), Postives = 78/120 (65.00%), Query Frame = 2 Query: 173 ASRKLQGEIDRVLKKVHEGVDVFNSIWNKVYD-TDYANQMEKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTYAFSKEGLGQQPKL 529 A RKLQ E+DRV KK++EG+++FNS + + T+ +Q +K E+DLK+E+KKLQR R+ IK+W S +IKDK +L+D R+ +E ME++K EK +K A+S L + L Sbjct: 2 AHRKLQQEVDRVFKKINEGLEIFNSYYERHESCTNNPSQKDKLESDLKREVKKLQRLREQIKSWQSSPDIKDK-------DSLLDYRRSVEIAMEKYKAVEKASKEKAYSNISLKKSETL 114
BLAST of CX294237 vs. ExPASy Swiss-Prot
Match: NOT3_SCHPO (General negative regulator of transcription subunit 3 OS=Schizosaccharomyces pombe GN=not3 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.784e-19 Identity = 50/102 (49.02%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 224 EGVDVFNSIWNKVYDTDYANQMEKFEADLKKEIKKLQRYRDHIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTYAFSKEGLGQQPKL 529 E + +F+ ++ K+ ++ +Q EK E DLK +IKKLQR RD IKTW S++IKDKK AL++ R+LIE +ME FK E+E K AFSKEGL KL Sbjct: 9 EKIAIFDEVYEKLSASNSVSQKEKLEGDLKTQIKKLQRLRDQIKTWASSNDIKDKK-------ALLENRRLIEAKMEEFKAVEREMKIKAFSKEGLSIASKL 103 The following BLAST results are available for this feature:
BLAST of CX294237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294237 ID=CX294237; Name=CX294237; organism=Citrus clementina; type=EST; length=530bpback to top |