CX294242

Overview
NameCX294242
Unique NameCX294242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length393
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: GDL87_ARATH (GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana GN=At5g55050 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.114e-17
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 1
Query:    1 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLY-HPTQATARIFVDTIFDGPSQYTFPINLRNLIA 231
            NP   GF +V SACCG G L A +PC+P++ +CS+R+ H+FWD Y HPT+A AR  VD +    + Y+ PI L  L++
Sbjct:  298 NPARYGFADVTSACCGNGELNADLPCLPLAKLCSDRTKHLFWDRYGHPTEAAARTIVDLMLTDDTHYSSPITLTQLVS 375          
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: GDL28_ARATH (GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.481e-15
Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query:    1 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPINLRNL 225
            NP   GF+ V  ACCG+GR + ++ C+P+ + C NR+ +VFWD +HPTQ    I     F GP    +P+N++ +
Sbjct:  296 NPAAYGFSVVDRACCGIGRNQGQITCLPLQTPCPNRNQYVFWDAFHPTQTANSILARRAFYGPPSDAYPVNVQQM 370          
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.078e-13
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 1
Query:    1 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPINLRNLIA 231
            NP   GF   K ACCG G    +  C P+S++CS+R+ + FWD +HPT+   R+ V  I  G  +Y  P+NL  ++A
Sbjct:  286 NPQRFGFVTSKVACCGQGAYNGQGVCTPLSTLCSDRNAYAFWDPFHPTEKATRLIVQQIMTGSVEYMNPMNLSTIMA 362          
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.938e-13
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1
Query:   16 GFTEVKSACCGL-GRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPINLRNL 225
            GF     ACC   GRL   +PC P SS+C++RS HVFWD YHPT+A   +  D +  G S++  P NL +L
Sbjct:  301 GFRTASEACCETRGRLAGILPCGPTSSLCTDRSKHVFWDAYHPTEAANLLIADKLLYGDSKFVTPFNLLHL 371          
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.037e-12
Identity = 32/72 (44.44%), Postives = 41/72 (56.94%), Query Frame = 1
Query:    1 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPINL 216
            NP   GF   K ACCG G       C P+S++C NR  + FWD +HPT+   RI V+ I  G S+Y  P+NL
Sbjct:  284 NPEQFGFVTSKVACCGQGPYNGIGLCTPVSNLCPNRDLYAFWDAFHPTEKANRIIVNQILTGSSKYMHPMNL 355          
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.037e-12
Identity = 31/75 (41.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query:    1 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPINLRNL 225
            NP   GF      CCG+GR + ++ C+P++  C+ R  HVFWD +HPTQA   I     F+G     +PINL  L
Sbjct:  308 NPFNYGFEVTDRGCCGVGRNRGEITCLPLAVPCAFRDRHVFWDAFHPTQAFNLIIALRAFNGSKSDCYPINLSQL 382          
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: GDL29_ARATH (GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.776e-12
Identity = 26/75 (34.67%), Postives = 40/75 (53.33%), Query Frame = 1
Query:    1 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPINLRNL 225
            N    G T +   CCG+G+ + ++ C+P  + C NR  +VFWD +HPT+    I     F G     +PIN++ L
Sbjct:  306 NQAAYGLTTMDKGCCGIGKNRGQITCLPFETPCPNRDQYVFWDAFHPTEKVNLIMAKKAFAGDRTVAYPINIQQL 380          
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.553e-11
Identity = 32/76 (42.11%), Postives = 43/76 (56.58%), Query Frame = 1
Query:    1 NPTPQGFTEVKSACCGL-GRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPINLRNL 225
            N +  GF   K  CC L G++   +PC P S VC +RS +VFWD YHPT+A   I    +  G +   +PIN+R L
Sbjct:  286 NYSSYGFESEKIPCCSLVGKVGGLIPCGPPSKVCMDRSKYVFWDPYHPTEAANIIIARRLLSGDTSDIYPINIRQL 361          
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.335e-11
Identity = 26/75 (34.67%), Postives = 41/75 (54.67%), Query Frame = 1
Query:    1 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPINLRNL 225
            NP+  G      ACCG GR    + C+P+   C +R+ +VFWD +HPT+   +I     F   + Y++PI++  L
Sbjct:  287 NPSRYGLVVSNEACCGNGRYGGALTCLPLQQPCLDRNQYVFWDAFHPTETANKIIAHNTFSKSANYSYPISVYEL 361          
BLAST of CX294242 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.355e-11
Identity = 28/76 (36.84%), Postives = 41/76 (53.95%), Query Frame = 1
Query:    1 NPTPQGFTEVKSACCGLGRLKAKVPCIPISSVCSNRSNHVFWDLYHPTQATARIFVDTIFDGPSQYTFPINLRNLI 228
            +P   GF   K ACCG G       C P+S++C NR    FWD +HP++  +RI    I +G  +Y  P+NL  ++
Sbjct:  285 DPQAYGFVTSKVACCGQGPYNGIGLCTPLSNLCPNRDLFAFWDPFHPSEKASRIIAQQILNGSPEYMHPMNLSTIL 360          
The following BLAST results are available for this feature:
BLAST of CX294242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
GDL87_ARATH3.114e-1747.44GDSL esterase/lipase At5g55050 OS=Arabidopsis thal... [more]
GDL28_ARATH8.481e-1540.00GDSL esterase/lipase At1g71250 OS=Arabidopsis thal... [more]
GDL67_ARATH6.078e-1340.26GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]
GDL58_ARATH7.938e-1346.48GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]
LTL1_ARATH1.037e-1244.44GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL75_ARATH1.037e-1241.33GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL29_ARATH8.776e-1234.67GDSL esterase/lipase At1g71691 OS=Arabidopsis thal... [more]
GDL64_ARATH2.553e-1142.11GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GLIP7_ARATH3.335e-1134.67GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
GDL79_ARATH4.355e-1136.84GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC05014A08SK AbsAOv1 Citrus clementina cDNA clone C05014A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294242 ID=CX294242; Name=CX294242; organism=Citrus clementina; type=EST; length=393bp
AACCCAACTCCACAGGGTTTTACCGAGGTTAAATCAGCTTGTTGTGGGCT
TGGTAGACTGAAGGCCAAGGTCCCATGCATCCCCATATCATCTGTCTGCT
CCAACAGAAGTAATCATGTCTTCTGGGATTTGTACCATCCAACTCAGGCA
ACTGCTCGCATTTTTGTGGATACTATTTTTGATGGTCCATCACAGTACAC
TTTTCCGATCAATTTGAGGAACCTAATAGCTGCTTAAGCTCAGTAATGTA
AACAGAAGACATTTGAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAACC
TTTTGGGCCCCCCTGGCCCATTTAATTTTTAAACTCAAAAATTTTTAGGC
GGGGGCCCCAATTTGGGCCTATTTGGCCAATTTCCCCTAAAGG
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