CX294261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH_DICDI (Clathrin heavy chain OS=Dictyostelium discoideum GN=chcA PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.554e-33 Identity = 53/92 (57.61%), Postives = 71/92 (77.17%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSW 297 A K+EKHELLE RR+AAY+YKK RW QS+ LSKKDK+YKDA+++AS S + + EELL YF++Q FA+CL+ CYD ++PD +EL+W Sbjct: 1497 AQKLEKHELLEFRRIAAYLYKKNNRWAQSVELSKKDKLYKDAIQSASDSKNPAIGEELLQYFVDQQNNSAFAACLYTCYDFLKPDAVIELAW 1588 HSP 2 Score: 39.6614 bits (91), Expect = 2.554e-33 Identity = 14/25 (56.00%), Postives = 23/25 (92.00%), Query Frame = 2 Query: 311 IDFAFPYLLQFIREYTGKVDELVKD 385 ++++FPYL+Q+++EYT KVD+LV D Sbjct: 1593 LNYSFPYLIQYVKEYTTKVDQLVDD 1617
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH_RAT (Clathrin heavy chain 1 OS=Rattus norvegicus GN=Cltc PE=1 SV=3) HSP 1 Score: 130.954 bits (328), Expect = 4.332e-33 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSW 297 A ++EKHEL+E RR+AAY++K RWKQS+ L KKD +YKDAM+ AS+S D ELAEELL +F+++ K+ECF +CLF CYDL+RPDV LE +W Sbjct: 1496 AQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAW 1587 HSP 2 Score: 31.187 bits (69), Expect = 4.332e-33 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 311 IDFAFPYLLQFIREYTGKVDEL 376 +DFA PY +Q ++EY KVD+L Sbjct: 1592 MDFAMPYFIQVMKEYLTKVDKL 1613
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH_MOUSE (Clathrin heavy chain 1 OS=Mus musculus GN=Cltc PE=1 SV=3) HSP 1 Score: 130.954 bits (328), Expect = 4.332e-33 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSW 297 A ++EKHEL+E RR+AAY++K RWKQS+ L KKD +YKDAM+ AS+S D ELAEELL +F+++ K+ECF +CLF CYDL+RPDV LE +W Sbjct: 1496 AQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAW 1587 HSP 2 Score: 31.187 bits (69), Expect = 4.332e-33 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 311 IDFAFPYLLQFIREYTGKVDEL 376 +DFA PY +Q ++EY KVD+L Sbjct: 1592 MDFAMPYFIQVMKEYLTKVDKL 1613
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH1_HUMAN (Clathrin heavy chain 1 OS=Homo sapiens GN=CLTC PE=1 SV=5) HSP 1 Score: 130.954 bits (328), Expect = 4.332e-33 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSW 297 A ++EKHEL+E RR+AAY++K RWKQS+ L KKD +YKDAM+ AS+S D ELAEELL +F+++ K+ECF +CLF CYDL+RPDV LE +W Sbjct: 1496 AQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAW 1587 HSP 2 Score: 31.187 bits (69), Expect = 4.332e-33 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 311 IDFAFPYLLQFIREYTGKVDEL 376 +DFA PY +Q ++EY KVD+L Sbjct: 1592 MDFAMPYFIQVMKEYLTKVDKL 1613
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH1_BOVIN (Clathrin heavy chain 1 OS=Bos taurus GN=CLTC PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.332e-33 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSW 297 A ++EKHEL+E RR+AAY++K RWKQS+ L KKD +YKDAM+ AS+S D ELAEELL +F+++ K+ECF +CLF CYDL+RPDV LE +W Sbjct: 1496 AQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAW 1587 HSP 2 Score: 31.187 bits (69), Expect = 4.332e-33 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 311 IDFAFPYLLQFIREYTGKVDEL 376 +DFA PY +Q ++EY KVD+L Sbjct: 1592 MDFAMPYFIQVMKEYLTKVDKL 1613
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH_DROME (Clathrin heavy chain OS=Drosophila melanogaster GN=Chc PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.028e-29 Identity = 59/107 (55.14%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWIEQHDRLCLPISLAV 342 A K+EKHEL E RR+AAY+YK RWKQS+ L KKDK+YKDAME A++S +++AEELL +F+E+ +CFA+CL+ CYDL+RPDV LEL+W + +P + V Sbjct: 1497 AQKLEKHELTEFRRIAAYLYKGNNRWKQSVELCKKDKLYKDAMEYAAESCKQDIAEELLGWFLERDAYDCFAACLYQCYDLLRPDVILELAWKHKIVDFAMPYLIQV 1603
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH2_HUMAN (Clathrin heavy chain 2 OS=Homo sapiens GN=CLTCL1 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.120e-28 Identity = 57/107 (53.27%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWIEQHDRLCLPISLAV 342 A ++EKH+L+E R +AAY+YK W QS+ L KKD +YKDAM+ A++S D ELA++LL +F+E+GK+ECFA+CLF CYDL+RPD+ LEL+W L +P + V Sbjct: 1496 AQQLEKHQLMEFRCIAAYLYKGNNWWAQSVELCKKDHLYKDAMQHAAESRDAELAQKLLQWFLEEGKRECFAACLFTCYDLLRPDMVLELAWRHNLVDLAMPYFIQV 1602
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH_SCHPO (Probable clathrin heavy chain OS=Schizosaccharomyces pombe GN=chc1 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.169e-26 Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSW 297 A ++EKH LLE RR+AAYIY+K RW QSI LSK+D+ YKDA+ TA S +AE+L+ YF+E G ECFA+ L+ CY L+R D+ +E+SW Sbjct: 1491 ARRLEKHSLLEFRRIAAYIYRKNKRWTQSIELSKQDRFYKDAIITARDSDQTTIAEDLMKYFVEIGNYECFAAILYTCYHLLRNDLVMEISW 1582 HSP 2 Score: 25.0238 bits (53), Expect = 7.169e-26 Identity = 12/29 (41.38%), Postives = 16/29 (55.17%), Query Frame = 2 Query: 314 DFAFPYLLQFIREYTGKVDELVKDKIEAQ 400 D+A+PY + F E KV L KD + Q Sbjct: 1588 DYAYPYFINFQCEMFSKVLNLEKDLKDRQ 1616
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH_CAEEL (Probable clathrin heavy chain 1 OS=Caenorhabditis elegans GN=chc-1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.159e-25 Identity = 54/107 (50.47%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWIEQHDRLCLPISLAV 342 A ++EKH L+E RR++AY++K RWKQSI L KKDK+YKDAME A++S + ELAEELL +F+++ +CFA+ L+ CYDL+ PDV +EL+W + +P + V Sbjct: 1498 AQQLEKHPLVEFRRISAYLFKGNNRWKQSIELCKKDKLYKDAMEYAAESRNGELAEELLSFFLDEKLYDCFAASLYHCYDLLHPDVIMELAWKHKIMDYAMPYMIQV 1604
BLAST of CX294261 vs. ExPASy Swiss-Prot
Match: CLH_YEAST (Clathrin heavy chain OS=Saccharomyces cerevisiae GN=CHC1 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 36/107 (33.64%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 22 AGKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWIEQHDRLCLPISLAV 342 A ++E H+L+ +++ A +Y++ +W +S+++ K++K++KDA+ETA+ S D ++ E LL YF+E G +E F + L+ Y+L+R + LE+SW+ + P +++ Sbjct: 1502 ASRLESHKLIFFKKIGALLYRRNKKWAKSLSILKEEKLWKDAIETAAISQDPKVVEALLTYFVETGNREGFVALLYAAYNLVRIEFVLEISWMNSLEDYIKPFEISI 1608 The following BLAST results are available for this feature:
BLAST of CX294261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294261 ID=CX294261; Name=CX294261; organism=Citrus clementina; type=EST; length=594bpback to top |