CX294559

Overview
NameCX294559
Unique NameCX294559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5597 contig Ccv1_Contig5597:178..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.194e-51
Identity = 102/199 (51.26%), Postives = 135/199 (67.84%), Query Frame = 2
Query:   26 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            MA  + +  L TG K+P +GLGTW+S PG V +AV  A+  GYRHIDCA +YGNE E+G  +K+    D  +KRE++++TSKLWN  H P+DV  AL +TL++LQ+DYLDLYLMHWP   K+G   F P+N       D  D   TWKAME L + G A+AIG+SNF+ +++ D+L +A V PAV QVECHP   Q +L
Sbjct:    1 MATSVEYETLYTGQKMPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQELQLDYLDLYLMHWPYAFKRGDQVF-PQNPDGSVQYDLTDYKDTWKAMEKLVEKGLAKAIGLSNFNKRQMDDILSIATVKPAVLQVECHPYLAQNEL 198          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1A1_XENTR (Alcohol dehydrogenase [NADP+] OS=Xenopus tropicalis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.858e-50
Identity = 101/199 (50.75%), Postives = 132/199 (66.33%), Query Frame = 2
Query:   26 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            MA  + +  L TG KIP +GLGTW+S PG V +AV  A+  GYRHIDCA +YGNE E+G  +K+    D  + RE++++TSKLWN  H P+DV  AL +TL+DLQ+DYLDLYLMHWP   K+G   F P+N       D  D   TWKAME L   G  +AIG+SNF+ +++ D++ +A V PAV QVECHP   Q +L
Sbjct:    1 MATAVEYETLYTGQKIPLIGLGTWKSAPGQVKDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGSDKGLSREEVFVTSKLWNNKHHPDDVECALRKTLQDLQLDYLDLYLMHWPYAFKRGDQIF-PQNPDGSVQYDLTDYKDTWKAMEKLVKQGLTKAIGLSNFNKRQIDDIISIATVKPAVLQVECHPYLAQNEL 198          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.858e-50
Identity = 102/191 (53.40%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   50 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDA-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            +L+TG K+P +GLGTW+S+PG V  AV  A+  GYRHIDCA IYGNE EIG  LK+       V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+EAL   G  RA+G+SNF+++++ D+L VA V PAV QVECHP   Q +L
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALQKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTICYDSTHYKETWKALEALVAKGLVRALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNEL 196          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.426e-50
Identity = 101/191 (52.88%), Postives = 130/191 (68.06%), Query Frame = 2
Query:   50 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDA-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            +L+TG K+P +GLGTW+SDPG V  A+  A+  GYRHIDCA IYGNE EIG  LK+      +V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TW+A+EAL   G  RA+G+SNF+++++ D+L VA V PAV QVECHP   Q +L
Sbjct:    7 LLHTGQKMPLIGLGTWKSDPGQVKAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDSPF-PKNADGTIRYDSTHYKETWRALEALVAKGLVRALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNEL 196          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 7.059e-50
Identity = 99/191 (51.83%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   50 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            +L+TG K+P +GLGTW+S+PG V  A+  A+ AGYRHIDCA +YGNE EIG  LK+       V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+E L   G  +A+G+SNF+++++ D+L VA V PAV QVECHP   Q +L
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTVRYDSTHYKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLAQNEL 196          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.059e-50
Identity = 101/190 (53.16%), Postives = 128/190 (67.37%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            L  G KIP +GLGTW+S+PG V  AV  A+  GYRH+DCA  Y NE EIG   ++    + V+KREDL++TSKLWN  H PEDV  AL +TL DL++DYLDLYLMHWP   ++G   F P+N       D  D   TWKAME L + G A+AIG+SNF+++++ D+L VA V PAV QVECHP   Q +L
Sbjct:   10 LYNGQKIPLIGLGTWKSEPGQVKEAVKYALSVGYRHVDCAAAYSNEAEIGDAFQECVGPNKVIKREDLFVTSKLWNTKHHPEDVEPALRKTLADLKLDYLDLYLMHWPHAFERGDNLF-PKNPDGTMRYDYTDYKDTWKAMEKLVEKGLAKAIGLSNFNSRQIDDVLSVATVKPAVLQVECHPYLAQNEL 198          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1A1_RAT (Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus GN=Akr1a1 PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 9.219e-50
Identity = 99/191 (51.83%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   50 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFF-EDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            +L+TG K+P +GLGTW+S+PG V  A+  A+  GYRHIDCA +YGNE EIG  LK+       V RE+L++TSKLWN  H PEDV  A+ +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+EAL   G  +A+G+SNFS++++ D+L VA V PAV QVECHP   Q +L
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAIKYALSVGYRHIDCASVYGNETEIGEALKESVGAGKAVPREELFVTSKLWNTKHHPEDVEPAVRKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTVKYDSTHYKETWKALEALVAKGLVKALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNEL 196          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 196.438 bits (498), Expect = 9.219e-50
Identity = 101/191 (52.88%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   50 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDA-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            +L+TG K+P +GLGTW+S+PG V  AV  A+  GYRHIDCA IYGNE EIG  LK+       V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+EAL   G  +A+G+SNF+++++ D+L VA V PAV QVECHP   Q +L
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTICYDSTHYKETWKALEALVAKGLVQALGLSNFNSRQIDDILSVASVRPAVLQVECHPYLAQNEL 196          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.054e-49
Identity = 101/191 (52.88%), Postives = 128/191 (67.02%), Query Frame = 2
Query:   50 VLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDA-VVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            +L+TG K+P +GLGTW+S+PG V  A+  A+  GYRHIDCA IYGNE EIG  L +       V RE+L++TSKLWN  H PEDV  AL +TL DLQ++YLDLYLMHWP   ++G   F P+N       D      TWKA+EAL   G  RA+G+SNFS++++ D+L VA V PAV QVECHP   Q +L
Sbjct:    7 LLHTGQKMPLIGLGTWKSEPGQVKAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPF-PKNADGTIRYDATHYKDTWKALEALVAKGLVRALGLSNFSSRQIDDVLSVASVRPAVLQVECHPYLAQNEL 196          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: YDG7_SCHPO (Uncharacterized oxidoreductase C26F1.07 OS=Schizosaccharomyces pombe GN=SPAC26F1.07 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 7.804e-49
Identity = 100/193 (51.81%), Postives = 131/193 (67.88%), Query Frame = 2
Query:   44 HFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF---KPENL--DKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            HF L  G+KIP +GLGTW+S+P    NAV  A++ GYRHID A IYGNE E+G  +K    ++ V R+D+W+TSKLW   H PE VP+AL++TL+DL++DYLD YL+HWPV  K G   F   K  NL  +K  I  TWKAME L ++GK R IG+SNF+   L  +L+VA+V PAV+Q+E HP   Q +  E
Sbjct:   15 HFTLADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK----ESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKFPKDKDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNFNDTNLERILKVAKVKPAVHQMELHPFLPQTEFVE 203          
The following BLAST results are available for this feature:
BLAST of CX294559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
AK1A1_XENLA2.194e-5151.26Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
AK1A1_XENTR1.858e-5050.75Alcohol dehydrogenase [NADP+] OS=Xenopus tropicali... [more]
AK1A1_PONAB1.858e-5053.40Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]
AK1A1_BOVIN2.426e-5052.88Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
AK1A1_MOUSE7.059e-5051.83Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
AK1A1_CHICK7.059e-5053.16Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]
AK1A1_RAT9.219e-5051.83Alcohol dehydrogenase [NADP+] OS=Rattus norvegicus... [more]
AK1A1_HUMAN9.219e-5052.88Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]
AK1A1_PIG2.054e-4952.88Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
YDG7_SCHPO7.804e-4951.81Uncharacterized oxidoreductase C26F1.07 OS=Schizos... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05054C01SK FlavRip1 Citrus clementina cDNA clone C05054C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294559 ID=CX294559; Name=CX294559; organism=Citrus clementina; type=EST; length=608bp
TCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACACTTCG
TGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAG
TCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGCCATCAAGGCTGG
ATACCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTG
GTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTCAAGCGTGAGGAT
TTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGT
ACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTG
ATCTATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGC
TTCAAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGC
AATGGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCA
ATTTTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCACGTGTGCCT
CCTGCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCT
TCGTGAAT
back to top