CX294717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 5.810e-59 Identity = 118/171 (69.01%), Postives = 134/171 (78.36%), Query Frame = 2 Query: 74 MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG-GAASQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILETDEIKDLKPLNDRVFIKV 583 MA QLTAS + + ARSL S DGLR SSVKF+S+ G Q FRRL PKYTSIKPLGDRVLVKIK EEKT GGI LPS AQ+KPQ GEVVAVGEG+T+GK K+DI+V G Q+IYSKYAGTE+EFN HLI++EDD+VGILET++IKDLKPLNDRVFIKV Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKV 171 HSP 2 Score: 73.559 bits (179), Expect = 8.220e-13 Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELE-FNGAXHLIVREDDVVGIL 526 +KPL DRV +K+ EEKT GG+ L + KP G V+AVG G + K+ + V G+ V+YSKYAG + + +G+ ++ +R DV+ IL Sbjct: 160 LKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGSNYIALRASDVMAIL 252
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.906e-47 Identity = 97/174 (55.75%), Postives = 125/174 (71.84%), Query Frame = 2 Query: 74 MATAQLTASSIKVPARSLTSFDGLRPSS----VKFASVGGAASQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILETDEIKDLKPLNDRVFIKV 583 MA LT++S + +L SF+GLR +S + + + + RSFR L KYTS+KPLGDRVL+K K VEEKT GIFLP+AAQ KPQ+GEVVA+G GK VG KL ++VK G +V+YSKY GTE+E +G+ HLIV+EDD++GILETD++KDLKPLNDR+ IKV Sbjct: 1 MAATHLTSTS-SLTINTLPSFEGLRSASGISKINVSVAYPSFTSRSFRGLVVRAASITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKV 173 HSP 2 Score: 71.633 bits (174), Expect = 3.124e-12 Identity = 36/93 (38.71%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELE-FNGAXHLIVREDDVVGIL 526 +KPL DR+L+K+ VE KT GG+ L +++ KP G VVA G G + ++ + V G V+YSKYAG + + +G+ ++++R DV+ +L Sbjct: 162 LKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDGSDYMVLRVSDVMAVL 254
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22 Identity = 49/94 (52.13%), Postives = 72/94 (76.60%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 ++KPLGDR+++KI EEKT+ GI LP A+ KPQ GEVVAVG GKT+ +K++ VK G +V+YSK+AG E+E +G +LI+R+DD++ ++E Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSKVEPEVKAGDKVVYSKFAGNEVEVDGEEYLIMRQDDILAVIE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22 Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22 Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22 Identity = 48/92 (52.17%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + K+++ VK G +VI+SKYAGTE++ +G +L++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.679e-22 Identity = 46/95 (48.42%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 254 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILETDE 538 IKPL DRV++K + EEKT+ G+++P A+ KPQ G V+AVG G+ K+++SVK G +V+Y KYAGTE+ +G +LI+RE D++GI+E ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_DESVV (10 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.652e-21 Identity = 49/94 (52.13%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 ++KPL DRVLVK EEKT GG+++P A+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.652e-21 Identity = 49/94 (52.13%), Postives = 68/94 (72.34%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 ++KPL DRVLVK EEKT GG+++P A+ KP GEVVA G GKT KL ++VK G V+++KYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95
BLAST of CX294717 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.158e-21 Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 251 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGAXHLIVREDDVVGILE 529 ++KPL DRVLVK EEKT GG+F+P A+ KP GEVVA G GK KL ++VK G V++SKYAGTE++ +G HL++REDD++ I+E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIKLDGVEHLVMREDDILAIIE 95 The following BLAST results are available for this feature:
BLAST of CX294717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294717 ID=CX294717; Name=CX294717; organism=Citrus clementina; type=EST; length=585bpback to top |