CX294843

Overview
NameCX294843
Unique NameCX294843
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length588
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10970 contig Ccv1_Contig10970:376..963. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 364.385 bits (934), Expect = 2.360e-100
Identity = 176/189 (93.12%), Postives = 186/189 (98.41%), Query Frame = 2 
Query:   20 EVVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            ++VNKQKPIWMRKPEEI KEEYAAFYKSL+NDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNCE++IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDS N+TK+AELLRYHSTKSGDELTS
Sbjct:  259 DLVNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHSTKSGDELTS 447
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 2.360e-100
Identity = 176/189 (93.12%), Postives = 186/189 (98.41%), Query Frame = 2 
Query:   20 EVVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            ++VNKQKPIWMRKPEEI KEEYAAFYKSL+NDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNCE++IPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDS N+TK+AELLRYHSTKSGDELTS
Sbjct:  259 DLVNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAELLRYHSTKSGDELTS 447
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 6.865e-100
Identity = 179/194 (92.27%), Postives = 187/194 (96.39%), Query Frame = 2 
Query:   11 IRHE--VVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            + HE  V+NKQKPIW+RKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGIVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDSTN+TK+AELLRYHSTKSGDELTS
Sbjct:  256 VSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTS 449
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 6.865e-100
Identity = 179/194 (92.27%), Postives = 187/194 (96.39%), Query Frame = 2 
Query:   11 IRHE--VVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            + HE  V+NKQKPIW+RKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGIVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDSTN+TK+AELLRYHSTKSGDELTS
Sbjct:  256 VSHEWNVMNKQKPIWLRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTS 449
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 1.171e-99
Identity = 175/188 (93.09%), Postives = 183/188 (97.34%), Query Frame = 2 
Query:   23 VVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            +VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKA+LFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNC+ELIPEYL FVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDS N+ K AELLRYHSTKSGDE+TS
Sbjct:  260 LVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKFAELLRYHSTKSGDEMTS 447
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 360.918 bits (925), Expect = 2.609e-99
Identity = 178/194 (91.75%), Postives = 186/194 (95.88%), Query Frame = 2 
Query:   11 IRHE--VVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            + HE  +VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKA+LFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGIVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDSTN+ K+AELLRYHSTKSGDELTS
Sbjct:  256 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTS 449
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 2.609e-99
Identity = 178/194 (91.75%), Postives = 186/194 (95.88%), Query Frame = 2 
Query:   11 IRHE--VVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            + HE  +VNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKA+LFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGIVDSEDLPLNISRE LQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDSTN+ K+AELLRYHSTKSGDELTS
Sbjct:  256 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTS 449
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 2.208e-98
Identity = 171/189 (90.48%), Postives = 184/189 (97.35%), Query Frame = 2 
Query:   20 EVVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            +++NKQKPIW+RKPEEITK+EYA+FYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYLGFVKG+VDS+DLPLNISRE LQQNKILKVIRKNLVKKCIE+F EIAENKEDYNKFYE+FSKNLKLGIHEDS N+ KLA+LLRYHSTKSGDE+TS
Sbjct:   60 QLINKQKPIWLRKPEEITKDEYASFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRAKLADLLRYHSTKSGDEMTS 248
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 355.91 bits (912), Expect = 8.392e-98
Identity = 171/189 (90.48%), Postives = 183/189 (96.83%), Query Frame = 2 
Query:   20 EVVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            E++NKQKPIW+RKPEEITKEEYAAFYKSLTNDWE+HLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYL FVKG+VDS+DLPLNISRETLQQNKILKVIRKNLVKKCIE+F EIAENKEDY KFYE+FSKNLKLGIHEDS N+ K+A+LLRYHSTKSGDE+TS
Sbjct:  260 ELINKQKPIWLRKPEEITKEEYAAFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLSFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYTKFYEAFSKNLKLGIHEDSQNRGKIADLLRYHSTKSGDEMTS 448
[Close]
BLAST of CX294843 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 1.431e-97
Identity = 170/189 (89.95%), Postives = 184/189 (97.35%), Query Frame = 2 
Query:   20 EVVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTS 586
            +++NKQKPIW+RKPEEITKEEYA+FYKSLTNDWE+HLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYLGFVKG+VDS+DLPLNISRE LQQNKILKVIRKNLVKKCIE+F EIAENK+DYNKFYE+FSKNLKLGIHEDS N+ KLA+LLRY+STKSGDELTS
Sbjct:  264 QLINKQKPIWLRKPEEITKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQNKILKVIRKNLVKKCIEMFNEIAENKDDYNKFYEAFSKNLKLGIHEDSQNRAKLADLLRYYSTKSGDELTS 452
The following BLAST results are available for this feature:
BLAST of CX294843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 382
Match NameE-valueIdentityDescription
HSP83_ARATH2.360e-10093.12Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH2.360e-10093.12Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP83_ORYSJ6.865e-10092.27Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ6.865e-10092.27Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP80_SOLLC1.171e-9993.09Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP81_ORYSJ2.609e-9991.75Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI2.609e-9991.75Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP82_TOBAC2.208e-9890.48Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HSP81_ARATH8.392e-9890.48Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP83_IPONI1.431e-9789.95Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05056F04SK PhIFruit1 Citrus clementina cDNA clone C05056F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294843 ID=CX294843; Name=CX294843; organism=Citrus clementina; type=EST; length=588bp
CTCGTGCCGAATTCGGCACGAGGTGGTGAACAAGCAGAAACCCATTTGGA
TGAGGAAACCTGAGGAGATTACAAAAGAAGAGTATGCTGCCTTCTACAAG
AGTCTGACTAATGACTGGGAGGAGCACTTGGCTGTGAAGCACTTCTCAGT
TGAGGGCCAGCTTGAGTTTAAGGCTATCCTCTTTGTTCCCAAGAGGGCAC
CTTTTGATCTCTTTGACACAAGGAAGAAGCCCAATAATATCAAGCTCTAC
GTCCGCCGTGTCTTCATCATGGACAACTGTGAGGAGTTGATCCCCGAATA
CCTTGGTTTTGTTAAGGGTATTGTTGATTCCGAGGATCTCCCTCTTAACA
TCTCAAGAGAAACACTCCAGCAGAACAAGATCTTGAAGGTCATCCGCAAG
AACTTGGTGAAGAAGTGCATTGAGCTCTTCCAAGAGATTGCTGAGAACAA
GGAAGATTACAACAAGTTTTATGAGTCATTCTCTAAGAACCTAAAGCTTG
GTATCCATGAGGACTCCACCAACAAGACCAAGCTTGCTGAGCTGCTCCGA
TACCATTCCACCAAGAGTGGTGATGAGTTGACTAGCTT
back to top