CX294871

Overview
NameCX294871
Unique NameCX294871
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length641
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX294871 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.627e-13
Identity = 56/212 (26.42%), Postives = 98/212 (46.23%), Query Frame = 3 
Query:   39 HKKPKPHAIAICYPLQGHVIPFVNLALKLASSGFTITFVNTHSIHHQITKAQSNGDEDDIFAGARKAGLDIRYATVSDGLP-LNFDRSLNHDQFMECLLHVFSAHVDELVG--NLIQLNPEMNCLVTDTFFVWSSMIAKKYNLVNISFWTEPALVITLYYHMDLLRSHG-------HFASTDNREDT-IDYIPGVRA*NERLDVISSATDTS 641
            H   KPH + + YP QGH+ P + +A  L + GF +TFVNT   H++  +++ +   D +           R+ +++DGLP  + D + +     E  +    A   EL+   N     P ++C+V+D    ++  +A++  +  + FWT        Y H  L    G        + + +  EDT ID+IP ++  N +L  I S   T+
Sbjct:    7 HNSQKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGL--------PSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDFIPTMK--NVKLKDIPSFIRTT 208
The following BLAST results are available for this feature:
BLAST of CX294871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
COGT2_ARATH7.627e-1326.42Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC05056H08SK PhIFruit1 Citrus clementina cDNA clone C05056H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294871 ID=CX294871; Name=CX294871; organism=Citrus clementina; type=EST; length=641bp
GTCATTCCCATCATAAAAAGCTAGAGATGGAGAACAATCACAAAAAACCT
AAGCCTCATGCAATTGCGATCTGCTACCCTCTCCAAGGTCACGTTATTCC
TTTTGTGAATCTAGCCCTGAAGCTCGCCTCCAGTGGCTTTACCATCACCT
TTGTCAACACTCATTCAATCCATCACCAAATAACCAAGGCTCAATCCAAC
GGTGACGAGGACGACATCTTTGCCGGCGCACGTAAAGCCGGTCTAGATAT
ACGTTACGCAACGGTCAGTGATGGGCTTCCTTTAAATTTTGACCGATCAC
TCAACCATGACCAGTTCATGGAATGTCTTTTACATGTGTTCTCTGCACAT
GTTGATGAACTTGTTGGAAATTTAATCCAATTGAACCCCGAAATGAATTG
CTTAGTTACCGACACTTTTTTTGTTTGGTCCTCAATGATTGCCAAGAAAT
ATAACCTTGTTAATATCTCGTTTTGGACTGAACCAGCTCTTGTTATAACT
CTTTATTATCACATGGATCTCCTAAGAAGTCATGGCCACTTTGCTTCTAC
TGATAATCGTGAGGACACCATTGACTATATACCGGGAGTTCGGGCATAGA
ACGAAAGACTTGATGTCATATCTTCAGCTACAGACACATCA
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