CX294921

Overview
NameCX294921
Unique NameCX294921
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length612
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.652e-48
Identity = 89/112 (79.46%), Postives = 98/112 (87.50%), Query Frame = 1
Query:   22 AMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAKQ 357
            +MMSL+ILTPF+IAVE PQMWAAGWQ A++Q+GPNFVWWV AQS+FYHLYNQVSYMSLDQISPLTFSIGNTMKR          FHTP+QPVNALGAAIAI GTF+YSQAKQ
Sbjct:  277 SMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQAKQ 388          
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 8.131e-46
Identity = 87/111 (78.38%), Postives = 94/111 (84.68%), Query Frame = 1
Query:   22 AMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 354
            +M+SLLILTPFAIAVEGPQMW  GWQ A+A +GP FVWWV AQS+FYHLYNQVSYMSLDQISPLTFS+GNTMKR          F TPVQPVNALGAAIAILGTF+YSQAK
Sbjct:  277 SMLSLLILTPFAIAVEGPQMWVDGWQTALATVGPQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQAK 387          
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.684e-14
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   22 AMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 354
            +++SLL   P AI +EGPQ+   G+  AIA++G     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +    A+G +IAI G  +YS  K
Sbjct:  284 SIISLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTKFISDLFWVG---MFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYSLIK 395          
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.284e-14
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 1
Query:   22 AMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFV---WWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 354
            ++++L +  P AI VEGPQ+   G+  AIA++G   F+   +WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +    A+G +IAI G  +YS  K
Sbjct:  280 SIIALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTKFISDLFWVG---MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYSLIK 391          
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.072e-13
Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 1
Query:   22 AMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 354
            ++++LL   P A+  EGPQ+   G+  AIA++G     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +    A+G +IAI G  IYS  K
Sbjct:  283 SIIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVG---MFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYSLIK 394          
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.828e-13
Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   22 AMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 354
            ++++L+   P AI +EGPQ+   G+  AIA++G   FV  +    +FYHLYNQV+  +L++++PLT ++GN +KR          F   +     +G  IAI G  IYS  K
Sbjct:  290 SIIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYSFIK 401          
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.388e-13
Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   25 MMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAKQ 357
            +MSL ++ P     EG +   +  Q A   +   +   + A ++ +H Y QVSYM L ++SP+T S+GN +KR          F TPV PVNA G  IA+ G F+YS+ K+
Sbjct:  285 LMSLFLMAPVTFFSEGIKFTPSYIQSAGVNVQQIYTKSLIA-ALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYSRVKR 394          
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.119e-13
Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 1
Query:   22 AMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIGP----NFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 354
            ++++L +  P AI VEGPQ+   G+  AIA++G     + ++WV    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +     +G  IAI G  +YS  K
Sbjct:  283 SIIALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTKFISDLFWVG---MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYSVIK 394          
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13
Identity = 37/112 (33.04%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   22 AMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG-PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 354
            ++++L++  P A+  EGP++   G+  AIA++G   FV  +    +FYHLYNQ++  +L++++PLT ++GN +KR          F   +     +G +IAI G  +YS  K
Sbjct:  286 SIIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYSYIK 397          
BLAST of CX294921 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.948e-13
Identity = 38/115 (33.04%), Postives = 66/115 (57.39%), Query Frame = 1
Query:   22 AMMSLLILTPFAIAVEGPQMWAAGWQKAIAQIG----PNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSIGNTMKRXXXXXXXXXXFHTPVQPVNALGAAIAILGTFIYSQAK 354
            ++++L++  P A+ +EGP +   G+  AIA++G     + ++WV    +FYHLYNQV+  +L++++PLT ++GN +KR          F   +     +G  IAI G  +YS  K
Sbjct:  278 SIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVG---MFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYSFIK 389          
The following BLAST results are available for this feature:
BLAST of CX294921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GPT2_ARATH6.652e-4879.46Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH8.131e-4678.38Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_FLAPR3.684e-1436.52Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL6.284e-1436.52Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR1.072e-1335.65Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU1.828e-1336.61Triose phosphate/phosphate translocator, chloropla... [more]
TPT2_BRAOB2.388e-1336.94Triose phosphate/phosphate translocator, non-green... [more]
TPT1_BRAOB3.119e-1334.78Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE5.320e-1333.04Triose phosphate/phosphate translocator, chloropla... [more]
TPT_PEA6.948e-1333.04Triose phosphate/phosphate translocator, chloropla... [more]
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Properties
Property NameValue
Genbank descriptionC05057E09SK PhIFruit1 Citrus clementina cDNA clone C05057E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294921 ID=CX294921; Name=CX294921; organism=Citrus clementina; type=EST; length=612bp
CTCGTGCCGAATCGGCACGAGGCTATGATGTCTCTTTTGATTCTCACACC
ATTTGCAATTGCTGTGGAGGGCCCTCAGATGTGGGCTGCTGGCTGGCAAA
AGGCTATTGCTCAAATTGGTCCCAACTTTGTGTGGTGGGTAGCGGCACAG
AGTATCTTCTATCACTTGTACAACCAAGTTTCATACATGTCTCTCGATCA
AATTTCTCCATTGACATTCAGCATTGGCAACACAATGAAGCGAATCTCTG
TCATAGTCTCCTCCATCATCATCTTCCACACGCCAGTTCAACCCGTCAAT
GCTCTTGGAGCCGCCATTGCAATACTCGGCACCTTCATCTATTCACAGGC
AAAGCAGTGAACGTGTGAAGGATTTTGAGGTGGTTTTGCCGCATAGTCTA
TGAGTTCTGCTGGAACTATTCGCATCGAAGTCTGACAGAAGATTGATTGA
AAAAAAAAAAAAAAAAAAGACGCGGCTACAGTGGACGGAATGATGCTTTT
ATTCCTTGTAATCAAGAGTAGTATCTATAATATTCTCATGATGCTTGCAG
CCAGATAAGTGTACAAGGTTTTTTTCACCCGAGAGCAGATTGTGGGTTAA
TGCCTTTGTTGT
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