CX294932

Overview
NameCX294932
Unique NameCX294932
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length565
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 4.397e-85
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGT
Sbjct:    1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGT 159
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 2.182e-84
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTK+GVVLAVEKR+TSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA+CDLALRFGEGDEESMSRPFGVSLLIAG DENGPSLYYTDPSGT
Sbjct:    1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGT 159
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 6.349e-84
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTKEGVVLAVEKRITSPLLEPSSVEKIMEID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGT
Sbjct:    1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGT 159
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1)

HSP 1 Score: 309.686 bits (792), Expect = 6.349e-84
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTKEGVVLAVEKRITSPLLEPSSVEKIMEID+HIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEG+EESMSRPFGVSLLIAG DENGPSLYYTDPSGT
Sbjct:    1 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGT 159
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 8.330e-68
Identity = 124/162 (76.54%), Postives = 145/162 (89.51%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGE---GDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MF+TR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+KTK+ VVL VEKR+TSPL+E  SVEK+ EID HIGCA+SGL ADART++EHARV+TQNHRF+Y EP  +ESTTQ++CDLALRFGE   G+E  MSRPFGV+LLIAG DE+GP LY+++PSGT
Sbjct:    1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGT 162
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.737e-65
Identity = 122/162 (75.31%), Postives = 144/162 (88.89%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGE---GDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MFLTR+EYDRGVNTFSPEGRLFQVEYA+EAIKLG   IG++ +EGVVLAVEKR+TSPLLEPSS++K++EID H+ CA+SGL+ADART+++HAR+ETQNHRF+Y EPM VES  Q++CDLALRFGE     EE MSRPFGV+LLIAG DE GPSLYY+DPSGT
Sbjct:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYALEAIKLG---IGVQCEEGVVLAVEKRLTSPLLEPSSIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGT 159
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.963e-65
Identity = 124/161 (77.02%), Postives = 142/161 (88.20%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MFLTR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG++T EGV LAVEKRITSPL+EPSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D +  +MSRPFGV+LL  G DE GP L++ DPSGT
Sbjct:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGT 161
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3)

HSP 1 Score: 247.669 bits (631), Expect = 2.963e-65
Identity = 124/161 (77.02%), Postives = 142/161 (88.20%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MFLTR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG++T EGV LAVEKRITSPL+EPSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D +  +MSRPFGV+LL  G DE GP L++ DPSGT
Sbjct:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGT 161
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.963e-65
Identity = 124/161 (77.02%), Postives = 142/161 (88.20%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MFLTR+EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG++T EGV LAVEKRITSPL+EPSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D +  +MSRPFGV+LL  G DE GP L++ DPSGT
Sbjct:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGT 161
[Close]
BLAST of CX294932 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 5.588e-64
Identity = 122/161 (75.78%), Postives = 140/161 (86.96%), Query Frame = 3 
Query:   87 MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEE--SMSRPFGVSLLIAGSDENGPSLYYTDPSGT 563
            MFLTR+EYDRGVNTFSPEGRLFQVEYAIE  KLGSTAIG++T EGV LAVEKRITSPL+EPSS+EKI+EID HIGCAMSGLIADA+TL++ ARVETQNH F+Y E MTVES TQA+ +LAL+FGE D +  +MSRPFGV+LL  G DE GP L++ DPSGT
Sbjct:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGT 161
The following BLAST results are available for this feature:
BLAST of CX294932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
PSA5_SOYBN4.397e-8599.37Proteasome subunit alpha type-5 OS=Glycine max GN=... [more]
PSA5_ORYSJ2.182e-8497.48Proteasome subunit alpha type-5 OS=Oryza sativa su... [more]
PSA5B_ARATH6.349e-8497.48Proteasome subunit alpha type-5-B OS=Arabidopsis t... [more]
PSA5A_ARATH6.349e-8497.48Proteasome subunit alpha type-5-A OS=Arabidopsis t... [more]
PSA5_SCHPO8.330e-6876.54Probable proteasome subunit alpha type-5 OS=Schizo... [more]
PSA5_DICDI1.737e-6575.31Proteasome subunit alpha type-5 OS=Dictyostelium d... [more]
PSA5_MOUSE2.963e-6577.02Proteasome subunit alpha type-5 OS=Mus musculus GN... [more]
PSA5_HUMAN2.963e-6577.02Proteasome subunit alpha type-5 OS=Homo sapiens GN... [more]
PSA5_BOVIN2.963e-6577.02Proteasome subunit alpha type-5 OS=Bos taurus GN=P... [more]
PSA5_RAT5.588e-6475.78Proteasome subunit alpha type-5 OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionC05057F12SK PhIFruit1 Citrus clementina cDNA clone C05057F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294932 ID=CX294932; Name=CX294932; organism=Citrus clementina; type=EST; length=565bp
CTCGTGCCGAATTCGGCACGAGGCTCTAACACAGTTCCGGTATCAACTCT
TAAGCTCAGGTTTCCAGATCCAATCAGCAACAAAACATGTTCCTTACAAG
GACTGAGTATGATAGAGGAGTGAACACTTTCTCTCCAGAAGGAAGATTGT
TTCAGGTCGAATATGCTATTGAGGCCATTAAGCTGGGTTCAACTGCAATT
GGGTTGAAGACGAAAGAAGGGGTTGTGCTTGCTGTCGAGAAACGCATTAC
TTCACCACTGCTGGAGCCCAGCAGCGTGGAGAAGATTATGGAAATTGATG
AGCATATAGGATGTGCTATGAGTGGATTGATTGCTGATGCTCGTACACTT
GTTGAACATGCAAGGGTTGAAACTCAGAATCATAGATTCTCATATGGTGA
GCCAATGACCGTAGAATCTACTACACAAGCACTCTGTGACCTGGCGCTAC
GCTTTGGTGAAGGCGATGAAGAATCCATGTCTCGACCATTTGGAGTATCC
CTTCTTATTGCTGGATCTGACGAGAATGGACCTAGCCTGTACTATACAGA
TCCATCTGGCACATT
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