CX294933

Overview
NameCX294933
Unique NameCX294933
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length619
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: CN138_MOUSE (Uncharacterized protein C14orf138 homolog OS=Mus musculus GN=Gm71 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 3
Query:  195 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIRSTSVHEEMLQMWKKHFNV 614
            L  + V+ELG+G G  G   A LG +VI TD  E+  LLK N++ N   ++         GS+QA  L WG ED    ++P  DYI+  D +Y E  LEPLL+T+  LSG  T I+  YE R+   + E   + KK+F +
Sbjct:   66 LSRRSVLELGSGTGAVGLMAATLGADVIVTDLEELQDLLKMNIDMNKHLVT---------GSVQAKVLKWG-EDIEDLMSP--DYILMADCIYYEESLEPLLKTLKDLSGSETCIICCYEQRTMGKNPE---IEKKYFEL 190          
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: CN138_HUMAN (Uncharacterized protein C14orf138 OS=Homo sapiens GN=C14orf138 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 3
Query:  195 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIRSTSVHEEMLQMWKKHFNV 614
            L  + V+ELG+G G  G   A LG +V+ TD  E+  LLK N+  N   ++         GS+QA  L WG E  I+    P D+I+  D +Y E  LEPLL+T+  +SG  T I+  YE R+   + E   + KK+F +
Sbjct:   66 LSRRSVLELGSGTGAVGLMAATLGADVVVTDLEELQDLLKMNINMNKHLVT---------GSVQAKVLKWGEE--IEGFPSPPDFILMADCIYYEESLEPLLKTLKDISGFETCIICCYEQRTMGKNPE---IEKKYFEL 191          
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: F119A_DANRE (Protein FAM119A OS=Danio rerio GN=fam119a PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 55/141 (39.01%), Postives = 70/141 (49.65%), Query Frame = 3
Query:  195 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIRSTSVHEEMLQMWKKHFNVK 617
            LKGKRVIELGAG G+ G   ALLG NV  TD+   L  L  NV  N  +  Q         ++Q  EL WG    +      +D I+G D+VY E     LLQT+  LS   T +LL   IR     E  L   ++ F+V+
Sbjct:   64 LKGKRVIELGAGTGLVGIVAALLGANVTITDREPALEFLTANVHENIPQGRQK--------AVQVSELTWGENLDLYPQG-GYDLILGADIVYLEETFPALLQTLEHLSSGDTVVLLSCRIRYER-DERFLTELRQRFSVQ 194          
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: F119A_XENTR (Protein FAM119A OS=Xenopus tropicalis GN=fam119a PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12
Identity = 48/140 (34.29%), Postives = 66/140 (47.14%), Query Frame = 3
Query:  195 LKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIRSTSVHEEMLQMWKKHFNV 614
            L+   VIELGAG G+ G   ALLG  V  TD+   +  L+ NV  N  +        D L  +    L+WG           +D+I+G D++Y E     LLQT   LS   + ILL   +R    H + L+M K HF +
Sbjct:   64 LQNSSVIELGAGTGLVGIVAALLGAQVTITDRDLAMEFLRMNVRDNIPK--------DSLHRVSVRALNWGKS---LEEFSTYDFILGADIIYLEETFPDLLQTFLHLSSQQSVILLSSRLRYQRDH-DFLEMMKLHFTI 191          
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: F119B_XENTR (Protein FAM119B OS=Xenopus tropicalis GN=fam119b PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12
Identity = 48/131 (36.64%), Postives = 69/131 (52.67%), Query Frame = 3
Query:  174 GRFCPSKL--KGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIR 560
            G F   KL  KGK+VIELGAG G+ G  ++LLG +V  TD    L  +++NV  N   +S  NP        Q   L WG +   +     +D+++G D+VY       L+QT+  L GP T+I L  ++R
Sbjct:   66 GYFEEQKLDFKGKKVIELGAGTGIVGILVSLLGGHVTLTDLPHALSQIQKNVSAN---VSSNNPP-------QVCALSWGLDQ--EKFPQDYDFVLGADIVYLHDTYPLLIQTLQYLCGPQTSIFLSSKMR 184          
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: F119B_BOVIN (Protein FAM119B OS=Bos taurus GN=FAM119B PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.945e-12
Identity = 49/141 (34.75%), Postives = 71/141 (50.35%), Query Frame = 3
Query:  198 KGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIRSTSVHEEMLQ-MWKKHFNVK 617
            +GK+VIELGAG G+ G   AL G +V  TD    LPL+   ++ N    + + PG    G  Q   L WG + H+      +D ++G D+VY E     LL T+  L GP  TI L  ++R     E   Q +  +HF ++
Sbjct:   75 RGKKVIELGAGTGIVGILAALQGGDVTITD----LPLVLEQIQGNVQ--ANVPPG----GRAQVRALSWGIDQHV--FPGDYDLVLGADIVYLEPTFPLLLGTLRHLCGPHGTIYLASKMREEHGTESFFQHLLPQHFQLE 203          
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: YM009_MOUSE (UPF0567 protein LOC121952 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.324e-11
Identity = 54/160 (33.75%), Postives = 70/160 (43.75%), Query Frame = 3
Query:  132 GHQLQFSQEKNCRKGRFCPSKLK---------------GKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG--NEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIR 560
            GH++Q ++ K+C      PS L                 K VIE+GAG G+     +LLG  VI TD  E+L  L+ N+  NT    +  P        Q  EL WG   + +    +  FDYI+  DVVYA   LE LL T   L    T IL     R
Sbjct:   52 GHEIQITEGKDCYGAFVWPSALVLCYFLETHAKQYNMVDKNVIEIGAGTGLVSIVASLLGARVIATDLPELLGNLQYNISRNTKMKCKHLP--------QVKELSWGVALDRNFPRSSNNFDYILAADVVYAHPFLEELLMTFDHLCKETTIILWAMRFR 203          
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: YM009_HUMAN (Putative UPF0567 protein LOC121952 OS=Homo sapiens PE=5 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11
Identity = 54/170 (31.76%), Postives = 76/170 (44.71%), Query Frame = 3
Query:  102 STSVINLEVLGHQLQFSQEKNCRKGRFCPSKLK---------------GKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWG--NEDHIKAVAPPFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIR 560
            +TS  +   +GH+++ ++  +C      PS L                 K VIE+GAG G+     +LLG +V  TD  E+L  L+ N+  NT   S+  P        Q  EL WG   + +    +  FDYI+  DVVYA   LE LL T   L    T IL   + R
Sbjct:   69 TTSWESFHFIGHEIRITEAMDCYGAVVWPSALVLCYFLETNAKQYNMVDKNVIEIGAGTGLVSIVASLLGAHVTATDLPELLGNLQYNISRNTKMKSKHLP--------QVKELSWGVALDTNFPRSSNNFDYILAADVVYAHPFLEELLITFDHLCKETTIILWAMKFR 230          
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: F119A_HUMAN (Protein FAM119A OS=Homo sapiens GN=FAM119A PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11
Identity = 49/143 (34.27%), Postives = 69/143 (48.25%), Query Frame = 3
Query:  192 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP-PFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIRSTSVHEEMLQMWKKHFNVK 617
            +L+G+  +ELGAG G+ G   ALLG +V  TD+   L  LK NV        Q N    +       EL WG   ++ + +P  FD I+G D++Y E     LLQT+  L    + ILL   IR        L M ++ F V+
Sbjct:   63 ELRGRSAVELGAGTGLVGIVAALLGAHVTITDRKVALEFLKSNV--------QANLPPHIQTKTVVKELTWG--QNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYER-DNNFLAMLERQFTVR 194          
BLAST of CX294933 vs. ExPASy Swiss-Prot
Match: F119A_MOUSE (Protein FAM119A OS=Mus musculus GN=Fam119a PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11
Identity = 50/142 (35.21%), Postives = 67/142 (47.18%), Query Frame = 3
Query:  192 KLKGKRVIELGAGCGVAGFGMALLGCNVITTDQIEVLPLLKRNVEWNTSRISQMNPGSDLLGSIQAVELDWGNEDHIKAVAP-PFDYIIGTDVVYAEHLLEPLLQTIFALSGPXTTILLGYEIRSTSVHEEMLQMWKKHFNV 614
            +L+G   +ELGAG G+ G   ALLG  V  TD+   L  LK NVE N            +       EL WG   ++++ +P  FD I+G DV+Y E     LLQT+  L    + ILL   IR        L M ++ F V
Sbjct:   63 ELRGCSAVELGAGTGLVGIVAALLGAQVTITDRKVALEFLKSNVEANLP--------PHIQPKAVVKELTWG--QNLESFSPGEFDLILGADVIYLEDTFTDLLQTLGHLCSNNSVILLACRIRYER-DSNFLTMLERQFTV 193          
The following BLAST results are available for this feature:
BLAST of CX294933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CN138_MOUSE4.399e-1539.29Uncharacterized protein C14orf138 homolog OS=Mus m... [more]
CN138_HUMAN7.503e-1537.14Uncharacterized protein C14orf138 OS=Homo sapiens ... [more]
F119A_DANRE2.183e-1439.01Protein FAM119A OS=Danio rerio GN=fam119a PE=2 SV=... [more]
F119A_XENTR1.198e-1234.29Protein FAM119A OS=Xenopus tropicalis GN=fam119a P... [more]
F119B_XENTR2.669e-1236.64Protein FAM119B OS=Xenopus tropicalis GN=fam119b P... [more]
F119B_BOVIN5.945e-1234.75Protein FAM119B OS=Bos taurus GN=FAM119B PE=2 SV=1[more]
YM009_MOUSE1.324e-1133.75UPF0567 protein LOC121952 homolog OS=Mus musculus ... [more]
YM009_HUMAN2.951e-1131.76Putative UPF0567 protein LOC121952 OS=Homo sapiens... [more]
F119A_HUMAN2.951e-1134.27Protein FAM119A OS=Homo sapiens GN=FAM119A PE=2 SV... [more]
F119A_MOUSE8.585e-1135.21Protein FAM119A OS=Mus musculus GN=Fam119a PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionC05057G02SK PhIFruit1 Citrus clementina cDNA clone C05057G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294933 ID=CX294933; Name=CX294933; organism=Citrus clementina; type=EST; length=619bp
ATTTTGGTTGCAGCCCTCGACTTTAAACAGCTGAAATTCTTCAAGATCAG
CAGTGGCCTTTCCTTCACTGTCAAATGGAAGCCGATAGGTTAAACTCTCC
AAGCACTTCTGTAATTAATCTTGAAGTTCTGGGCCATCAACTTCAGTTCT
CTCAGGAAAAAAATTGCCGAAAAGGAAGGTTTTGCCCATCTAAACTTAAA
GGAAAACGTGTCATTGAACTTGGTGCAGGTTGTGGAGTAGCTGGGTTTGG
GATGGCATTGCTTGGATGTAATGTAATTACAACAGACCAAATAGAGGTTT
TACCATTACTAAAGAGAAATGTTGAATGGAATACATCAAGAATCAGCCAG
ATGAACCCTGGTTCAGATTTGCTTGGCTCAATCCAGGCTGTGGAGTTGGA
CTGGGGAAACGAGGATCATATAAAAGCTGTCGCCCCACCTTTTGACTATA
TCATTGGCACTGATGTTGTTTATGCAGAGCATCTCTTGGAACCACTTTTA
CAAACAATATTTGCATTATCAGGGCCCANAACTACAATTCTGTTGGGCTA
TGAGATTCGCTCTACAAGTGTCCATGAGGAAATGCTTCAAATGTGGAAAA
AGCATTTCAATGTGAAACT
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