CX294963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPD1_ARATH (Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 8.856e-39 Identity = 78/156 (50.00%), Postives = 102/156 (65.38%), Query Frame = 3 Query: 54 KESNKNGSAGAIPSCCLKARASAPELDAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 +E + NG A ++ + + C STV+ GWFSE +PMWPGEAHSLKV+++LF+GKS+YQ+V+VF+S YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK RE++RH S+E ID+CE Sbjct: 15 REEDDNGGAAT-----METENGDQKKEPACFSTVIPGWFSEM--------------SPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCE 151
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPD2_DATST (Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 2.577e-38 Identity = 76/130 (58.46%), Postives = 94/130 (72.31%), Query Frame = 3 Query: 132 DAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 ++ C S+V+ GWFSE +P+WPGEAHSLKV++ILF+GKS+YQ+V+VF+S YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK RE+SRH SVE IDICE Sbjct: 18 ESPCISSVLPGWFSEI--------------SPLWPGEAHSLKVEKILFQGKSDYQDVMVFQSTTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICE 133
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPDE_COFAR (Spermidine synthase OS=Coffea arabica PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.279e-37 Identity = 77/125 (61.60%), Postives = 91/125 (72.80%), Query Frame = 3 Query: 147 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S+V+ GWFSE +PMWPGEAHSLKV++ILF+GKS+YQ V+VF+S YGKVLVLDG++QLTE+DECAYQEMIAHLPLCSIPSPK RE++RH SVE IDICE Sbjct: 21 SSVIPGWFSEI--------------SPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMIAHLPLCSIPSPKKVLVIGGGDGGVLREVARHLSVEQIDICE 131
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPDE_NICSY (Spermidine synthase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.670e-37 Identity = 76/125 (60.80%), Postives = 91/125 (72.80%), Query Frame = 3 Query: 147 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S+V+ GWFSE +P+WPGEAHSLKV++ILF+GKS+YQ V+VF+S YGKVLVLDG++QLTE+DECAYQEMIAHLPLCSIP+PK RE+SRH SVE IDICE Sbjct: 19 SSVLPGWFSEI--------------SPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMIAHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICE 129
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPD2_PEA (Spermidine synthase 2 OS=Pisum sativum GN=SPDSYN2 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.670e-37 Identity = 74/125 (59.20%), Postives = 91/125 (72.80%), Query Frame = 3 Query: 147 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S+V+ GWFSE +PMWPGEAHSLK+++ILF+GKSEYQ+V+VF+S YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK RE++RH S+E IDICE Sbjct: 48 SSVIPGWFSEI--------------SPMWPGEAHSLKIEKILFQGKSEYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSIEKIDICE 158
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPD2_ARATH (Spermidine synthase 2 OS=Arabidopsis thaliana GN=SPDSYN2 PE=1 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 1.670e-37 Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 3 Query: 132 DAKCHSTVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 + C S+++ GWFSE +PMWPGEAHSLKV++ILF+GKS+YQ+V+VF+S YGKVLVLDG++QLTE+DECAYQEMI HLPLCSI +PK RE++RH SVE IDICE Sbjct: 40 EPSCMSSIIPGWFSEI--------------SPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQIDICE 155
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPD1_PEA (Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.670e-37 Identity = 74/125 (59.20%), Postives = 91/125 (72.80%), Query Frame = 3 Query: 147 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S+V+ GWFSE +PMWPGEAHSLKV++ILF+GKS+YQ+V+VF+S YGKVL+LDG++QLTE+DECAYQEMI HLPLCSIP+PK RE++RH SVE IDICE Sbjct: 40 SSVIPGWFSEI--------------SPMWPGEAHSLKVEKILFQGKSDYQDVMVFQSATYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSVEKIDICE 150
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPDE_SOLLC (Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.849e-37 Identity = 76/125 (60.80%), Postives = 90/125 (72.00%), Query Frame = 3 Query: 147 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S+V+ GWFSE +P+WPGEAHSLKV++ILF+GKS+YQ VLVF+S YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK RE+SRH SVE IDICE Sbjct: 48 SSVLPGWFSEI--------------SPLWPGEAHSLKVEKILFQGKSDYQNVLVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICE 158
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPD1_HYONI (Spermidine synthase 1 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.860e-37 Identity = 75/125 (60.00%), Postives = 90/125 (72.00%), Query Frame = 3 Query: 147 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S+V+ GWFSE +P+WPGEAHSLKV++ILF+GKS+YQ V+VF+S YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK RE+SRH SVE IDICE Sbjct: 21 SSVLPGWFSEI--------------SPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICE 131
BLAST of CX294963 vs. ExPASy Swiss-Prot
Match: SPD2_HYONI (Spermidine synthase 2 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 8.289e-37 Identity = 74/125 (59.20%), Postives = 90/125 (72.00%), Query Frame = 3 Query: 147 STVVSGWFSESQSTSDKTGKTMYFNNPMWPGEAHSLKVKEILFKGKSEYQEVLVFESLAYGKVLVLDGIVQLTEKDECAYQEMIAHLPLCSIPSPKTXXXXXXXXXXXXREISRHDSVELIDICE 521 S+++ GWFSE +P+WPGEAHSLKV++ILF+GKS+YQ V+VF+S YGKVLVLDG++QLTE+DECAYQEMI HLPLCSIP+PK RE+SRH SVE IDICE Sbjct: 13 SSILPGWFSEI--------------SPLWPGEAHSLKVEKILFQGKSDYQNVVVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICE 123 The following BLAST results are available for this feature:
BLAST of CX294963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 127
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294963 ID=CX294963; Name=CX294963; organism=Citrus clementina; type=EST; length=523bpback to top |