CX295015
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295015 vs. ExPASy Swiss-Prot
Match: SPL14_ARATH (Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3) HSP 1 Score: 264.233 bits (674), Expect = 4.473e-70 Identity = 134/213 (62.91%), Postives = 170/213 (79.81%), Query Frame = 2 Query: 5 PRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSN-DTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPAGVE-IEQSGLAK 637 P SREEVL FLNELGWLFQ+ + S + + SD+SL+RFKFLLV SV+R CAL++ +LD+LVE NL D L+RE+L+ML EIQLLNRAVK K +MV+LLIHY + + +K++F PN+ GPGGITPLHLAACTS SDD+ID LTNDPQEIG SSWN++ DA+G +PYSYA ++NNH YN LVARKLAD+RN QV++ E ++Q+GL+K Sbjct: 745 PTSREEVLCFLNELGWLFQKNQTSELREQSDFSLARFKFLLVCSVERDYCALIRTLLDMLVERNLVNDELNREALDMLAEIQLLNRAVKRKSTKMVELLIHYLVNPLTLSSSRKFVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNKQVSLNIEHEVVDQTGLSK 957
BLAST of CX295015 vs. ExPASy Swiss-Prot
Match: SPL16_ARATH (Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2) HSP 1 Score: 262.307 bits (669), Expect = 1.700e-69 Identity = 136/228 (59.65%), Postives = 176/228 (77.19%), Query Frame = 2 Query: 2 RPRSREEVLHFLNELGWLFQRKRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGL-SRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPAGVEIEQSGLAKEQVHGLSSQFKQGVN 682 RPRSREEVL FLNELGWLFQRK S I D+SL RFKFLLV SV+R C+L++ +LD++VE NL DGL ++ESL+ML +IQLLNRA+K + +M + LIHYS+ N + + +IF P++AGPG ITPLHLAA TS SDD+IDALTNDPQEIG S WN+++DA+G +P+SYA M++NH+YN LVARKLAD+RNGQ+++ I+Q GL+K LSS+ K+ N Sbjct: 704 RPRSREEVLCFLNELGWLFQRKWTSDIHGEPDFSLPRFKFLLVCSVERDYCSLIRTVLDMMVERNLGKDGLLNKESLDMLADIQLLNRAIKRRNTKMAETLIHYSV---NPSTRNFIFLPSIAGPGDITPLHLAASTSSSDDMIDALTNDPQEIGLSCWNTLVDATGQTPFSYAAMRDNHSYNTLVARKLADKRNGQISLNIENGIDQIGLSKR----LSSELKRSCN 924
BLAST of CX295015 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSJ (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.263e-56 Identity = 116/225 (51.56%), Postives = 160/225 (71.11%), Query Frame = 2 Query: 2 RPRSREEVLHFLNELGWLFQRKRASSIVKGSD--------YSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPAG---VEIEQSGLAKEQ 643 R + ++EVLHFLNELGWLFQ+ AS+ + SD +S +RF++LL+FS +R C+L K +L+IL + +L+ D LS+E+LEML EI LLNRAVK K M LL+ + + +D+ + Y F PN+AGPGG+TPLHLAA D+ DI+DALT+DPQ+IG S W+S LD G SP +YA ++NN+AYN+LVA+KL DR+N QVTI G + ++QSG E+ Sbjct: 839 RLKPKDEVLHFLNELGWLFQKAAASTSAEKSDSSGLDLMYFSTARFRYLLLFSSERDWCSLTKTLLEILAKRSLASDELSQETLEMLSEIHLLNRAVKRKSSHMARLLVQFVVVCPDDS-KLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDRKNNQVTIMVGKEEIHMDQSGNVGEK 1062
BLAST of CX295015 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSI (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.263e-56 Identity = 116/225 (51.56%), Postives = 160/225 (71.11%), Query Frame = 2 Query: 2 RPRSREEVLHFLNELGWLFQRKRASSIVKGSD--------YSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQVTIPAG---VEIEQSGLAKEQ 643 R + ++EVLHFLNELGWLFQ+ AS+ + SD +S +RF++LL+FS +R C+L K +L+IL + +L+ D LS+E+LEML EI LLNRAVK K M LL+ + + +D+ + Y F PN+AGPGG+TPLHLAA D+ DI+DALT+DPQ+IG S W+S LD G SP +YA ++NN+AYN+LVA+KL DR+N QVTI G + ++QSG E+ Sbjct: 839 RLKPKDEVLHFLNELGWLFQKAAASTSAEKSDSSGLDLMYFSTARFRYLLLFSSERDWCSLTKTLLEILAKRSLASDELSQETLEMLSEIHLLNRAVKRKSSHMARLLVQFVVVCPDDS-KLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDRKNNQVTIMVGKEEIHMDQSGNVGEK 1062
BLAST of CX295015 vs. ExPASy Swiss-Prot
Match: SPL1_ORYSJ (Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.981e-31 Identity = 72/200 (36.00%), Postives = 123/200 (61.50%), Query Frame = 2 Query: 11 SREEVLHFLNELGWLFQRK--RASSIVKGS---DYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSS------NDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 577 SR+ L+FL+E GW QR RA+S + +RF++LL F+VDR CA++K +LD L +G + +D S ++E + + L+ AV + + ++D L+ Y+ +S+ + P +++F P++AGP ITPLH+AA SD+ ++DALT+DPQ++G +W + DA+G +P YA + + +Y ++V K+ R Sbjct: 551 SRDRALNFLHEFGWFLQRSHIRATSETPKDCTEGFPAARFRWLLSFAVDREFCAVIKKLLDTLFQGGVDLDVQS--TVEFVLKQDLVFVAVNKRSKPLIDFLLTYTTSSAPMDGTESAAPAQFLFTPDIAGPSDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWKNARDATGLTPEDYARKRGHESYIEMVQNKIDSR 748
BLAST of CX295015 vs. ExPASy Swiss-Prot
Match: SPL12_ARATH (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.031e-30 Identity = 82/231 (35.50%), Postives = 127/231 (54.98%), Query Frame = 2 Query: 11 SREEVLHFLNELGWLFQRKRASSIVKGSD------YSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLA----DRRNGQVTIPAGVEIEQSGLAKEQVHGLSSQFKQ 673 S + + F++E+GWL R S + SD +SL RFKFL+ FS+DR C ++K +L+IL E ++D +L E+ LL+RAV+ + MV++L+ +S N T +F P+ AGPGG+TPLH+AA S+D++DALT DP G +W + D +G +P YA ++ + +Y LV RKL+ + + V IP IE + + S + Q Sbjct: 635 SAMQAMDFIHEIGWLLHRSELKSRLAASDHNPEDLFSLIRFKFLIEFSMDREWCCVMKKLLNILFEEG-TVDPSPDAALS---ELCLLHRAVRKNSKPMVEMLLRFSPKKKNQTLAG-LFRPDAAGPGGLTPLHIAAGKDGSEDVLDALTEDPGMTGIQAWKNSRDNTGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEHVVVNIPESFNIEHKQEKRSPMDSSSLEITQ 860
BLAST of CX295015 vs. ExPASy Swiss-Prot
Match: SPL6_ORYSJ (Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.653e-30 Identity = 72/190 (37.89%), Postives = 112/190 (58.95%), Query Frame = 2 Query: 11 SREEVLHFLNELGWLFQRKRASSI---VKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSS-NDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 568 +R + L FLNELGWL R S V + +++ RF+ L +F+++R CA+ K +LD L G + + S E E++ LL+ AV+MK +MV L+ Y S T + ++F P+ GP TPLH+AA T D++D++DALTNDP +G ++W + D +G +P YA + N AY +V +K+ Sbjct: 674 ARNQALEFLNELGWLLHRANIISKQDKVPLASFNIWRFRNLGIFAMEREWCAVTKLLLDFLFTGLVDIGSQSPE--EVVLSENLLHAAVRMKSAQMVRFLLGYKPNESLKRTAETFLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNARDGAGFTPEDYARQRGNDAYLNMVEKKI 861
BLAST of CX295015 vs. ExPASy Swiss-Prot
Match: SPL1_ARATH (Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.531e-28 Identity = 65/187 (34.76%), Postives = 113/187 (60.43%), Query Frame = 2 Query: 11 SREEVLHFLNELGWLFQR-KRASSIVKGSDYSLSRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 568 S ++ + F++E+GWL R K S + L RF++L+ FS+DR CA+++ +L++ +G ++ S S L E+ LL+RAV+ + MV++L+ Y ++ +F P+ AGP G+TPLH+AA S+D++DALT DP +G +W + D++G +P YA ++ + +Y L+ RK+ Sbjct: 597 SAKQAMDFIHEIGWLLHRSKLGESDPNPGVFPLIRFQWLIEFSMDREWCAVIRKLLNMFFDG--AVGEFSSSSNATLSELCLLHRAVRKNSKPMVEMLLRYIPKQQRNS----LFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTEDPAMVGIEAWKTCRDSTGFTPEDYARLRGHFSYIHLIQRKI 777 The following BLAST results are available for this feature:
BLAST of CX295015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295015 ID=CX295015; Name=CX295015; organism=Citrus clementina; type=EST; length=683bpback to top |