CX295048
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: TDT_ARATH (Tonoplast dicarboxylate transporter OS=Arabidopsis thaliana GN=TDT PE=2 SV=2) HSP 1 Score: 282.722 bits (722), Expect = 1.369e-75 Identity = 149/227 (65.64%), Postives = 164/227 (72.25%), Query Frame = 1 Query: 7 ISLWMTRSITDDIPGWGALFNDRAGDGTASVSTLWSFVYHLRT*LNETCLIKLLDDF*LNY*YICIXXXXXXXXQI*VVMATLLFIIPSMKQKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIK 687 + LWMTR+ITDDIPGWG +F RAGDGT SV +MATLLFIIPS +KGEKLMDWNKCKKLPWNI+LLLGAGFAIADGVRTSGLA+ LSK L FLE APY AIAP VCLI+A ITEFTSNNATTTL++PLLI+IAK M +HPLLLMVPGAIGAQF+FLLPTGTPSN+VGFTTGHIEI+DMIK Sbjct: 330 VVLWMTRNITDDIPGWGRIFAGRAGDGTVSV-----------------------------------------------MMATLLFIIPSNIKKGEKLMDWNKCKKLPWNIVLLLGAGFAIADGVRTSGLAEVLSKGLVFLETAPYWAIAPTVCLIAATITEFTSNNATTTLLVPLLIEIAKNMGIHPLLLMVPGAIGAQFAFLLPTGTPSNVVGFTTGHIEIKDMIK 509
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: S13A3_MOUSE (Solute carrier family 13 member 3 OS=Mus musculus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.866e-31 Identity = 67/164 (40.85%), Postives = 98/164 (59.76%), Query Frame = 1 Query: 238 VVMATLLFIIPSMK-------------QKGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIK 687 V + T+LF PS K + E L+ W K ++ +PWNIILLLG GFA+A G SGL+ + L LE P L ++ ++ A TEF SN AT + LP+L ++A +HVHPL LM+PG +G ++F+LP TP N + F+TGH+ ++DM++ Sbjct: 381 VAIVTILFFFPSQKPSLKWWFDFKAPNSETEPLLSWKKAQETVPWNIILLLGGGFAMAKGCEESGLSAWIGGQLHPLEHVPPLLAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGTVGCSYAFMLPVSTPPNSIAFSTGHLLVKDMVR 544
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: SDCS_STAS1 (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sdcS PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.989e-30 Identity = 62/147 (42.18%), Postives = 96/147 (65.31%), Query Frame = 1 Query: 244 MATLLFIIPSM-KQKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDM 681 ++ LLF+IP+ K+K ++++DW K LPW +++L G G A+A G+ SGLA+ L + L +E L I ++ + +TE TSN AT T++LP+L ++ ++VHPLLLMVP A+ A +++LP GTP N + F TG I I+ M Sbjct: 335 ISVLLFLIPAKNKEKHKRIIDWEVAKDLPWGVLILFGGGLALAKGISESGLANWLGEQLKLIEGVSPLVIVLVITIFVLFLTEITSNTATATMILPILATLSVAVNVHPLLLMVPAAMAANCAYMLPVGTPPNAIVFGTGKISIKKM 481
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: S13A3_RAT (Solute carrier family 13 member 3 OS=Rattus norvegicus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.904e-30 Identity = 66/164 (40.24%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 238 VVMATLLFIIPSMK-------------QKGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIK 687 V + T+LF PS K + E L+ W K ++ +PWNIILLLG GFA+A G SGL+ + L LE P L ++ ++ A TEF SN AT + LP+L ++A +HVHPL LM+PG + ++F+LP TP N + F+TGH+ ++DM++ Sbjct: 381 VAIVTILFFFPSQKPSLKWWFDFKAPNSETEPLLSWKKAQETVPWNIILLLGGGFAMAKGCEESGLSAWIGGQLHPLEHVPPLLAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGTVSCSYAFMLPVSTPPNSIAFSTGHLLVKDMVR 544
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: S13A5_HUMAN (Solute carrier family 13 member 5 OS=Homo sapiens GN=SLC13A5 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.697e-30 Identity = 69/167 (41.32%), Postives = 102/167 (61.08%), Query Frame = 1 Query: 238 VVMATLLFIIPSMKQKGE----------------KLMDWNKCK-KLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIK 687 + +ATLLFI+PS K K L+DW + K+PW I+LLLG GFA+A G SGL+ + K ++ L A P AI I+ L+ A+ TE TSN ATTTL LP+ +++++ ++PL +M+P + A F+F+LP TP N + FT GH+++ DM+K Sbjct: 361 IFVATLLFIVPSQKPKFNFRSQTEEERKTPFYPPPLLDWKVTQEKVPWGIVLLLGGGFALAKGSEASGLSVWMGKQMEPLHAVPPAAITLILSLLVAVFTECTSNVATTTLFLPIFASMSRSIGLNPLYIMLPCTLSASFAFMLPVATPPNAIVFTYGHLKVADMVK 527
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: S13A3_HUMAN (Solute carrier family 13 member 3 OS=Homo sapiens GN=SLC13A3 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.142e-28 Identity = 64/164 (39.02%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 238 VVMATLLFIIPSMKQ-------------KGEKLMDWNKCKK-LPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDMIK 687 V + T+LF PS + + E L+ W K ++ +PWNIILLLG GFA+A G SGL+ + L LE P ++ ++ A TEF SN AT + LP+L ++A + VHPL LM+PG +G F+F+LP TP N + F +GH+ ++DM++ Sbjct: 383 VAIVTILFFFPSQRPSLKWWFDFKAPNTETEPLLTWKKAQETVPWNIILLLGGGFAMAKGCEESGLSVWIGGQLHPLENVPPALAVLLITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVR 546
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: SDCS_STAAR (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain MRSA252) GN=sdcS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27 Identity = 59/149 (39.60%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 238 VVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDM 681 + ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M Sbjct: 334 IFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQM 482
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: SDCS_STAAN (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain N315) GN=sdcS PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27 Identity = 59/149 (39.60%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 238 VVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDM 681 + ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M Sbjct: 334 IFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQM 482
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: SDCS_STAAM (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sdcS PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27 Identity = 59/149 (39.60%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 238 VVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDM 681 + ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M Sbjct: 334 IFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQM 482
BLAST of CX295048 vs. ExPASy Swiss-Prot
Match: SDCS_STAAC (Sodium-dependent dicarboxylate transporter sdcS OS=Staphylococcus aureus (strain COL) GN=sdcS PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27 Identity = 59/149 (39.60%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 238 VVMATLLFIIPSMK-QKGEKLMDWNKCKKLPWNIILLLGAGFAIADGVRTSGLADDLSKALDFLEAAPYLAIAPIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLLPTGTPSNIVGFTTGHIEIQDM 681 + ++ LLFIIP+ +K +++DW K+LPW +++L G G A+A G+ SGLA L + L L + I ++ + +TE TSN AT T++LP+L ++ + VHPLLLM P A+ A +++LP GTP N + F +G I I+ M Sbjct: 334 IFISILLFIIPAKNTEKHRRIIDWEVAKELPWGVLILFGGGLALAKGISESGLAKWLGEQLKSLNGVSPILIVIVITIFVLFLTEVTSNTATATMILPILATLSVAVGVHPLLLMAPAAMAANCAYMLPVGTPPNAIIFGSGKISIKQM 482 The following BLAST results are available for this feature:
BLAST of CX295048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295048 ID=CX295048; Name=CX295048; organism=Citrus clementina; type=EST; length=731bpback to top |