CX295075

Overview
NameCX295075
Unique NameCX295075
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length775
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295075 vs. ExPASy Swiss-Prot
Match: PGES2_MOUSE (Prostaglandin E synthase 2 OS=Mus musculus GN=Ptges2 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.521e-38
Identity = 78/147 (53.06%), Postives = 100/147 (68.03%), Query Frame = 2
Query:   56 EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDE-RAALYEAAETWVDAL-NGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTRMERVVGESSRI 490
            EE KWR W D+ LVHL+SPN+YR  +EAL SFDYI   G F   E   AKY GAAAMY +SK+LK ++++ D+ R  LYEAA  WV A+   R F+GG KPNLADLAV+GVLR +  L +  D++ H+ I  WY RMER + E+  +
Sbjct:  229 EEMKWRQWADDWLVHLISPNVYRTPAEALASFDYIVREGKFGAVEAAMAKYVGAAAMYLISKRLKSRHHLQDDVRVDLYEAANKWVTAVGKDRPFMGGQKPNLADLAVYGVLRVMEGLEAFDDLMRHSHIQPWYLRMERAIEEAPSV 375          
BLAST of CX295075 vs. ExPASy Swiss-Prot
Match: PGES2_MACFA (Prostaglandin E synthase 2 OS=Macaca fascicularis GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.292e-38
Identity = 79/145 (54.48%), Postives = 100/145 (68.97%), Query Frame = 2
Query:   56 EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDE-RAALYEAAETWVDAL-NGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTRMERVVGESS 484
            EE KWR W D+ LVHL+SPN+YR  +EAL SFDYI   G F   E   AKY GAAAMY +SK+LK ++ + D  R  LYEAA+ WV A+   R F+GG KPNLADLAV+GVLR +  L +  D+++HT I  WY R+ER + E+S
Sbjct:  230 EEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVGKDRPFMGGQKPNLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLRVERAITEAS 374          
BLAST of CX295075 vs. ExPASy Swiss-Prot
Match: PGES2_HUMAN (Prostaglandin E synthase 2 OS=Homo sapiens GN=PTGES2 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.292e-38
Identity = 79/145 (54.48%), Postives = 100/145 (68.97%), Query Frame = 2
Query:   56 EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNITDE-RAALYEAAETWVDAL-NGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTRMERVVGESS 484
            EE KWR W D+ LVHL+SPN+YR  +EAL SFDYI   G F   E   AKY GAAAMY +SK+LK ++ + D  R  LYEAA+ WV A+   R F+GG KPNLADLAV+GVLR +  L +  D+++HT I  WY R+ER + E+S
Sbjct:  230 EEMKWRQWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGAVEGAVAKYMGAAAMYLISKRLKSRHRLQDNVREDLYEAADKWVAAVGKDRPFMGGQKPNLADLAVYGVLRVMEGLDAFDDLMQHTHIQPWYLRVERAITEAS 374          
BLAST of CX295075 vs. ExPASy Swiss-Prot
Match: PGES2_DANRE (Prostaglandin E synthase 2 OS=Danio rerio GN=ptges2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.754e-37
Identity = 76/139 (54.68%), Postives = 100/139 (71.94%), Query Frame = 2
Query:   56 EEKKWRGWVDNHLVHLLSPNIYRNTSEALESFDYITSSGNFSFTEKLTAKYAGAAAMYFVSKKLKKKYNI-TDERAALYEAAETWVDAL-NGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVEHTRIGEWYTRMER 466
            EE KWR W D+ LVHL+SPN+YR  +EAL SFDYI   G F   E   AKY GAAAM+ +SK+LK K+N+  D R  LY+A   WV A+   ++F+GG +PNLADLAVFGVLR +  L+S  DM+EHT++ +WY+RM++
Sbjct:  233 EEIKWRTWADDWLVHLISPNVYRTPTEALASFDYIVREGKFGSFEGFFAKYFGAAAMWIISKRLKYKHNLQADVRQDLYKAVNDWVAAIGKNKQFMGGDEPNLADLAVFGVLRVMEGLQSFDDMMEHTKVKKWYSRMQK 371          
The following BLAST results are available for this feature:
BLAST of CX295075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PGES2_MOUSE2.521e-3853.06Prostaglandin E synthase 2 OS=Mus musculus GN=Ptge... [more]
PGES2_MACFA3.292e-3854.48Prostaglandin E synthase 2 OS=Macaca fascicularis ... [more]
PGES2_HUMAN3.292e-3854.48Prostaglandin E synthase 2 OS=Homo sapiens GN=PTGE... [more]
PGES2_DANRE4.754e-3754.68Prostaglandin E synthase 2 OS=Danio rerio GN=ptges... [more]
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Properties
Property NameValue
Genbank descriptionC05068C10SK DroRLeaf1 Citrus clementina cDNA clone C05068C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295075 ID=CX295075; Name=CX295075; organism=Citrus clementina; type=EST; length=775bp
GATTCGGCCGAGGATTACTCCAAAGAGGAAGGCCGATTCACCCTCTGGCG
ATGATGAAGAGAAAAAGTGGCGTGGATGGGTGGATAATCACCTTGTGCAT
CTGTTGTCCCCAAACATATATCGCAATACTTCTGAGGCTCTTGAGTCCTT
TGACTATATCACAAGCAGTGGCAATTTCAGCTTCACAGAAAAACTTACAG
CAAAATATGCTGGAGCTGCAGCAATGTATTTTGTGTCCAAAAAACTGAAA
AAGAAATACAATATTACTGATGAGCGCGCTGCATTATATGAAGCTGCAGA
AACATGGGTGGATGCTCTTAATGGTAGGGAATTTCTAGGGGGTTCGAAGC
CTAATTTAGCTGACCTTGCTGTGTTTGGAGTATTAAGACCAATCCGGTAC
CTAAGATCAGGTAGAGACATGGTGGAGCACACTCGAATAGGAGAGTGGTA
TACAAGAATGGAGCGAGTTGTTGGAGAGTCTTCGAGGATCAAGGCCTCCT
AAACTGGAAACCCAACCATTCTGTCTGGACTCTGCAGCGTTAAGTTTAAG
ATTATTCACCAAAAGTGACATTTTTGGTCTTCCCTTTTTGGGATAAATGA
TTATAATTTGGCAATTACAATTTATTGTTTGAAGAGGAAGTTTCGGGTAA
ACTGTAATATCAAGAGGCGACAGAATTCCTGAGCTAGGATTGTATATTTT
AAACAAAGACGTGGTTTTTATTTTTCGGTCCAATATAGTCTTAAATTTGA
TCCGTGCCTGGATTGGCTTCGGCAT
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