CX295132

Overview
NameCX295132
Unique NameCX295132
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295132 vs. ExPASy Swiss-Prot
Match: AMAB2_BACST (N-carbamoyl-L-amino acid hydrolase OS=Bacillus stearothermophilus GN=amaB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21
Identity = 55/167 (32.93%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  160 VDTETLQKRIDELSTFSDTPAPSVTRVLYTENDVLARSYIKNLMGLSGLSVREDAVGNIFGRWIGNEAELAPVATGSHIDAIPYSGKYDGVVGVLGAIEAINVLKRSGFKPRRSLEVIMFTSEEPTRYGISCLGSRLLAGIESLAKDLTSTVDGQNISFLDAARSAG 660
            +  E L +R+ EL      P+  VTR+ +T  +  A+  + + M  +GL V EDA GN+ GR  G   +   V  GSH+D++   G +DG +GVL  +E +  +   G      +EV+ FT EE  R+    +GSR +AG  +L  +     D + IS  +A + AG
Sbjct:    2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAG--TLPPEALECRDAEGISLAEAMKQAG 166          
BLAST of CX295132 vs. ExPASy Swiss-Prot
Match: AMAB1_BACST (N-carbamoyl-L-amino acid hydrolase OS=Bacillus stearothermophilus GN=amaB PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.234e-21
Identity = 55/167 (32.93%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  160 VDTETLQKRIDELSTFSDTPAPSVTRVLYTENDVLARSYIKNLMGLSGLSVREDAVGNIFGRWIGNEAELAPVATGSHIDAIPYSGKYDGVVGVLGAIEAINVLKRSGFKPRRSLEVIMFTSEEPTRYGISCLGSRLLAGIESLAKDLTSTVDGQNISFLDAARSAG 660
            +  E L +R+ EL      P+  VTR+ +T  +  A+  + + M  +GL V EDA GN+ GR  G   +   V  GSH+D++   G +DG +GVL  +E +  +   G      +EV+ FT EE  R+    +GSR +AG  +L  +     D + IS  +A + AG
Sbjct:    2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAG--TLPPEALECRDAEGISLAEAMKQAG 166          
BLAST of CX295132 vs. ExPASy Swiss-Prot
Match: Y588_HAEIN (Uncharacterized hydrolase HI0588 OS=Haemophilus influenzae GN=HI0588 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20
Identity = 60/169 (35.50%), Postives = 94/169 (55.62%), Query Frame = 1
Query:  154 LSVDTETLQKRIDELSTFSDTPAPSVTRVLYTENDVLARSYIKNLMGLSGLSVREDAVGNIFGRWIGNEAELAPVATGSHIDAIPYSGKYDGVVGVLGAIEAINVLKRSGFKPRRSLEVIMFTSEEPTRYGISCLGSRLLAGIESLAKDLTSTVDGQNISFLDAARSAG 660
            +S++   +Q  I++L+  S  P   +TR+ +TE D  A + I  L     LS+R D++GN+F R  G E  L  VA GSHID +  +GK+DG +G +  +E +  L     + R  LE+I+FT EE +R+  + LGS+++ GI +  K L+S  D Q     +A    G
Sbjct:    1 MSINLNRVQNLIEKLAFISSVPN-ELTRLAFTEEDEKAHNMIIELCKEYDLSIRRDSIGNLFIRKAGKEDFLPAVAFGSHIDTVVNAGKFDGPLGSVAGLEILLQLCEQNIQTRYPLELIIFTCEESSRFNFATLGSKVMCGIVNQEK-LSSLRDKQGKGLSEAMAEVG 167          
BLAST of CX295132 vs. ExPASy Swiss-Prot
Match: ALLC_BACSU (Allantoate amidohydrolase OS=Bacillus subtilis GN=pucF PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 56/161 (34.78%), Postives = 87/161 (54.04%), Query Frame = 1
Query:  187 IDELSTFSDTPAPSVTRVLYTENDVLARSYIKNLMGLSGLSVREDAVGNIFGRWIGNEAELAPVATGSHIDAIPYSGKYDGVVGVLGAIEAINVLKRSGFKPRRSLEVIMFTSEEPTRYGISCLGSRLLAGIESLAKDLTSTVDGQNISFLDAARSAGYAK 669
            I+ L+ +  +    VTR+LYT+  + A+  +K  M   GL  R D VGN+FGR  G ++    + TGSHID +   GKYDG  GVL A+ A+  LK +   P+++LE +    EE +R+ ++  GS  + G+ S  +D     D   +S   A   +G+ K
Sbjct:   16 IEWLAQYGASADGGVTRLLYTKEWMDAQLAVKTEMSSFGLETRFDDVGNVFGRLSGTQSPDEVIVTGSHIDTVINGGKYDGAYGVLAAMLALKQLKETYGAPKKTLEAVSLCEEEGSRFPMTYWGSGNMTGVFS-EQDAKEPRDESGVSLQTAMHESGFGK 175          
BLAST of CX295132 vs. ExPASy Swiss-Prot
Match: HYUC_PSESN (Hydantoin utilization protein C OS=Pseudomonas sp. (strain NS671) GN=hyuC PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19
Identity = 53/176 (30.11%), Postives = 90/176 (51.14%), Query Frame = 1
Query:  151 SLSVDTETLQKRIDELSTFSDTPAPSVTRVLYTENDVLARSYIKNLMGLSGLSVREDAVGNIFGRWIGNEAELAPVATGSHIDAIPYSGKYDGVVGVLGAIEAINVLKRSGFKPRRSLEVIMFTSEEPTRYGISCLGSRLLAGIESLAKDLTSTVDGQNISFLDAARSAGYAKEPN 678
            ++++  E L+  I++L     T    V R+  ++ D  A   +   M  +GL+V  D  GN+ GR  G    L  V  GSHID++   GK+DGV+GVL  IE ++ +  +      S+EV+ F  EE +R+     GSR + G   +  +    VD  N++  +A ++ G+  +P+
Sbjct:    3 TVTISKERLRIHIEQLGEIGKTKDKGVQRLALSKEDREATLLVSEWMREAGLTVTHDHFGNLIGRKEGETPSLPSVMIGSHIDSVRNGGKFDGVIGVLAGIEIVHAISEANVVHEHSIEVVAFCEEEGSRFNDGLFGSRGMVG--KVKPEDLQKVDDNNVTRYEALKTFGFGIDPD 176          
BLAST of CX295132 vs. ExPASy Swiss-Prot
Match: ALLC_ECOLI (Allantoate amidohydrolase OS=Escherichia coli (strain K12) GN=allC PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19
Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 1
Query:  169 ETLQKRIDELSTFSDTPAPSVTRVLYTENDVLARSYIKNLMGLSGLSVREDAVGNIFGRWIGNEAELAPVATGSHIDAIPYSGKYDGVVGVLGAIEAINVLKRSGFKPRRSLEVIMFTSEEPTRYGISCLGSRLLAGIESLAKDLTSTVDGQNISFLDAARSAGY 663
            + +++ +  LS+F   PA  +TR+LY+   +  +   K  M  SGL  R D VGN++GR  G E     V +GSHID +   G  DG  G L A  AI+ LK     P R++EV+    EE +R+     GS+ + G+ +   D+ +  D +  SF+DA ++ G+
Sbjct:    7 QAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLAN-PDDVRNICDAKGNSFVDAMKACGF 170          
BLAST of CX295132 vs. ExPASy Swiss-Prot
Match: AAH_ARATH (Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana GN=AAH PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.130e-14
Identity = 55/158 (34.81%), Postives = 81/158 (51.27%), Query Frame = 1
Query:  184 RIDELSTFSDTPAPSVTRVLYTENDVLARSYIKNLMGLSGLSVREDAVGNIFGRWIGNEAELAPVATGSHIDAIPYSGKYDGVVGVLGAIEAINVLKRSG--FKPRRSLEVIMFTSEEPTRYGISCLGSRLLAGIESLAKDLTSTVDGQNISFLDAAR 651
            R+ EL   SD  A  + R   +   + A   I+  M  +GLS   D +GN+ GR          +  GSH+D +  +GKYDG +G++ AI A+ VLK  G   + +R +EVI F+ EE  R+  + LGS  LAGI  +++      D   IS  DA +
Sbjct:   99 RLHELGQVSDA-ATHLERTFMSPASIRAIPLIRGWMEDAGLSTWVDYMGNVHGRVEPKNGSSQALLIGSHMDTVIDAGKYDGSLGIISAISALKVLKIDGRLGELKRPVEVIAFSDEEGVRFQSTFLGSAALAGIMPVSR--LEVTDKSGISVQDALK 253          
The following BLAST results are available for this feature:
BLAST of CX295132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
AMAB2_BACST5.234e-2132.93N-carbamoyl-L-amino acid hydrolase OS=Bacillus ste... [more]
AMAB1_BACST5.234e-2132.93N-carbamoyl-L-amino acid hydrolase OS=Bacillus ste... [more]
Y588_HAEIN1.989e-2035.50Uncharacterized hydrolase HI0588 OS=Haemophilus in... [more]
ALLC_BACSU2.199e-1934.78Allantoate amidohydrolase OS=Bacillus subtilis GN=... [more]
HYUC_PSESN3.751e-1930.11Hydantoin utilization protein C OS=Pseudomonas sp.... [more]
ALLC_ECOLI3.751e-1933.94Allantoate amidohydrolase OS=Escherichia coli (str... [more]
AAH_ARATH2.130e-1434.81Allantoate deiminase, chloroplastic OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionC05068H09SK DroRLeaf1 Citrus clementina cDNA clone C05068H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295132 ID=CX295132; Name=CX295132; organism=Citrus clementina; type=EST; length=698bp
CTGTATCATCTTCTTCTGGTTCTCGTAATCTTCTGTTCCATTTCTACAAT
CTACGCTGAAGCAAATGAAGATCCAACAATCAGAACTATGGAGGCTTTCT
CAGGGTACCCAATTCATGAATCAAACTCATTTGTTACAAACTTGGCTTCT
TCACTCTCAGTTGATACTGAAACTCTCCAAAAACGGATCGATGAACTGTC
AACTTTCTCGGACACTCCTGCCCCATCAGTTACTAGGGTCTTGTACACTG
AGAATGATGTATTGGCACGCAGCTACATCAAGAACTTGATGGGGCTTTCA
GGTCTCTCTGTTAGGGAGGATGCAGTTGGTAACATATTTGGTAGATGGAT
TGGCAATGAAGCAGAGCTTGCTCCAGTTGCAACAGGTTCTCACATTGATG
CCATTCCGTACTCTGGGAAGTATGATGGTGTTGTTGGTGTGCTAGGTGCA
ATAGAAGCCATTAATGTGCTAAAAAGATCTGGATTCAAGCCTAGAAGGTC
ACTGGAGGTTATCATGTTCACCTCAGAGGAGCCCACACGCTATGGGATCA
GTTGTTTGGGAAGTCGCTTATTGGCAGGAATTGAGTCACTTGCAAAAGAT
CTGACATCAACAGTTGATGGTCAAAATATATCCTTTTTAGATGCTGCAAG
ATCTGCTGGATACGCAAAAGAGCCCAATGACCTATCCAGTGTGTTTTT
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