CX295145
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AP2_ARATH (Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana GN=AP2 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.253e-49 Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASESSGHGV---DHNLD 671 QM+NLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYD+AA+KCNGKDAVTNFDPS+Y +EL A ESSG+ DHNLD Sbjct: 197 QMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPSIYDEELNA-ESSGNPTTPQDHNLD 305
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: TOE3_ARATH (AP2-like ethylene-responsive transcription factor TOE3 OS=Arabidopsis thaliana GN=TOE3 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.850e-44 Identity = 85/107 (79.44%), Postives = 98/107 (91.59%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELK-ASESSGHGVDHNL 668 QM NLTKEEF+HVLRRQSTGFPRGSSKYRGVTLHKCGRWE+R+GQFL KKYVYLGLFDTE+EAARAYD+AA+KCNGKDAVTNFDP +Y++E +SE++ +G HNL Sbjct: 162 QMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVYEEEEDLSSETTRNG--HNL 266 HSP 2 Score: 67.3958 bits (163), Expect = 9.252e-11 Identity = 42/80 (52.50%), Postives = 51/80 (63.75%), Query Frame = 3 Query: 396 RQSTGFPRG-SSKYRGVTLHK-CGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELK 629 ++S PR SS+YRGVT ++ GRWE+ + K VYLG FDT AARAYDRAA+K G DA NFD Y D+LK Sbjct: 84 KKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDC--GKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLK 161
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: RAP27_ARATH (Ethylene-responsive transcription factor RAP2-7 OS=Arabidopsis thaliana GN=RAP2-7 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 6.814e-30 Identity = 67/106 (63.21%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASESSGHGVDHNL 668 Q+ NL+KEEFVH+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK AYD+AA+ NG++AVTNF+ S YQ+E+ SES+ +D NL Sbjct: 219 QVQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK---------------AYDKAAINTNGREAVTNFEMSSYQNEIN-SESNNSEIDLNL 308
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: WRI1_ARATH (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana GN=WRI1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23 Identity = 55/94 (58.51%), Postives = 69/94 (73.40%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKC-GRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELK 629 +M +TKEE++ LRRQS+GF RG SKYRGV H GRWEAR+G+ G KY+YLG ++T+ EAA AYD AA++ G +AVTNFD S Y D LK Sbjct: 141 EMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 234
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AIL5_ARATH (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana GN=AIL5 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21 Identity = 53/96 (55.21%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKAS 635 +M ++T++EFV LRR+S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F T+ EAA AYD AA+K G +AVTNFD S Y + AS Sbjct: 279 EMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIAS 374
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.427e-21 Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 614 +M N+T++EFV +RR+S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F TE EAA AYD AA+K G +AVTNF+ + Y Sbjct: 266 EMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRY 354
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana GN=AIL7 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASES 641 +M+++TK+EF+ LRR+S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F TE EAA AYD AA+K G +AVTNF+ + Y E + S Sbjct: 249 EMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNSS 346
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AIL1_ARATH (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana GN=AIL1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 51/99 (51.52%), Postives = 71/99 (71.72%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASESS 644 +++N+ ++EFV +LRR S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F T+ EAA AYD AA+K G +AVTNFD + Y + S S+ Sbjct: 299 ELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRYDVKRICSSST 397
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 614 +M ++T++EFV +RR+S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F TE EAA AYD AA+K G +AVTNF+ + Y Sbjct: 257 EMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRY 345
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AIL6_ARATH (AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana GN=AIL6 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 3 Query: 351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDE 623 +M ++TK+EF+ LRR+S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F TE EAA AYD AA+K G +AVTNF+ + Y E Sbjct: 341 EMKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVE 432 The following BLAST results are available for this feature:
BLAST of CX295145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295145 ID=CX295145; Name=CX295145; organism=Citrus clementina; type=EST; length=741bpback to top |