CX295145

Overview
NameCX295145
Unique NameCX295145
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length741
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AP2_ARATH (Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana GN=AP2 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.253e-49
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASESSGHGV---DHNLD 671
            QM+NLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYD+AA+KCNGKDAVTNFDPS+Y +EL A ESSG+     DHNLD
Sbjct:  197 QMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDPSIYDEELNA-ESSGNPTTPQDHNLD 305          
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: TOE3_ARATH (AP2-like ethylene-responsive transcription factor TOE3 OS=Arabidopsis thaliana GN=TOE3 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.850e-44
Identity = 85/107 (79.44%), Postives = 98/107 (91.59%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELK-ASESSGHGVDHNL 668
            QM NLTKEEF+HVLRRQSTGFPRGSSKYRGVTLHKCGRWE+R+GQFL KKYVYLGLFDTE+EAARAYD+AA+KCNGKDAVTNFDP +Y++E   +SE++ +G  HNL
Sbjct:  162 QMGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVYEEEEDLSSETTRNG--HNL 266          

HSP 2 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 42/80 (52.50%), Postives = 51/80 (63.75%), Query Frame = 3
Query:  396 RQSTGFPRG-SSKYRGVTLHK-CGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELK 629
            ++S   PR  SS+YRGVT ++  GRWE+ +      K VYLG FDT   AARAYDRAA+K  G DA  NFD   Y D+LK
Sbjct:   84 KKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDC--GKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFDIEDYLDDLK 161          
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: RAP27_ARATH (Ethylene-responsive transcription factor RAP2-7 OS=Arabidopsis thaliana GN=RAP2-7 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.814e-30
Identity = 67/106 (63.21%), Postives = 79/106 (74.53%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASESSGHGVDHNL 668
            Q+ NL+KEEFVH+LRRQSTGF RGSSKYRGVTLHKCGRWEARMGQFLGKK               AYD+AA+  NG++AVTNF+ S YQ+E+  SES+   +D NL
Sbjct:  219 QVQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK---------------AYDKAAINTNGREAVTNFEMSSYQNEIN-SESNNSEIDLNL 308          
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: WRI1_ARATH (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana GN=WRI1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.123e-23
Identity = 55/94 (58.51%), Postives = 69/94 (73.40%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKC-GRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELK 629
            +M  +TKEE++  LRRQS+GF RG SKYRGV  H   GRWEAR+G+  G KY+YLG ++T+ EAA AYD AA++  G +AVTNFD S Y D LK
Sbjct:  141 EMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYNTQEEAAAAYDMAAIEYRGANAVTNFDISNYIDRLK 234          
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AIL5_ARATH (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana GN=AIL5 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21
Identity = 53/96 (55.21%), Postives = 70/96 (72.92%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKAS 635
            +M ++T++EFV  LRR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F T+ EAA AYD AA+K  G +AVTNFD S Y  +  AS
Sbjct:  279 EMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSIAS 374          
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.427e-21
Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 614
            +M N+T++EFV  +RR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F TE EAA AYD AA+K  G +AVTNF+ + Y
Sbjct:  266 EMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRY 354          
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana GN=AIL7 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21
Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASES 641
            +M+++TK+EF+  LRR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F TE EAA AYD AA+K  G +AVTNF+ + Y  E   + S
Sbjct:  249 EMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNSS 346          
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AIL1_ARATH (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana GN=AIL1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21
Identity = 51/99 (51.52%), Postives = 71/99 (71.72%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDELKASESS 644
            +++N+ ++EFV +LRR S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F T+ EAA AYD AA+K  G +AVTNFD + Y  +   S S+
Sbjct:  299 ELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRYDVKRICSSST 397          
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21
Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLY 614
            +M ++T++EFV  +RR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F TE EAA AYD AA+K  G +AVTNF+ + Y
Sbjct:  257 EMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRY 345          
BLAST of CX295145 vs. ExPASy Swiss-Prot
Match: AIL6_ARATH (AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana GN=AIL6 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21
Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 3
Query:  351 QMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDRAAVKCNGKDAVTNFDPSLYQDE 623
            +M ++TK+EF+  LRR+S+GF RG+S YRGVT H + GRW+AR+G+  G K +YLG F TE EAA AYD AA+K  G +AVTNF+ + Y  E
Sbjct:  341 EMKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVE 432          
The following BLAST results are available for this feature:
BLAST of CX295145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AP2_ARATH2.253e-4987.27Floral homeotic protein APETALA 2 OS=Arabidopsis t... [more]
TOE3_ARATH2.850e-4479.44AP2-like ethylene-responsive transcription factor ... [more]
RAP27_ARATH6.814e-3063.21Ethylene-responsive transcription factor RAP2-7 OS... [more]
WRI1_ARATH2.123e-2358.51Ethylene-responsive transcription factor WRI1 OS=A... [more]
AIL5_ARATH2.595e-2155.21AP2-like ethylene-responsive transcription factor ... [more]
PLET2_ARATH4.427e-2156.18AP2-like ethylene-responsive transcription factor ... [more]
AIL7_ARATH5.782e-2153.06AP2-like ethylene-responsive transcription factor ... [more]
AIL1_ARATH5.782e-2151.52AP2-like ethylene-responsive transcription factor ... [more]
PLET1_ARATH9.862e-2155.06AP2-like ethylene-responsive transcription factor ... [more]
AIL6_ARATH9.862e-2155.43AP2-like ethylene-responsive transcription factor ... [more]

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Properties
Property NameValue
Genbank descriptionC05069A10SK PhIFruit1 Citrus clementina cDNA clone C05069A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295145 ID=CX295145; Name=CX295145; organism=Citrus clementina; type=EST; length=741bp
GGGTGTTTGTAGGTGGATTTGACACTGCACATGCAGCTGCTCGTGCTTAT
GATAGGGCAGCTATCAAGTTCCGGGGAGCGGAGGCAGACATAAACTTTAG
TATAGAAGATTATGAGGATGACTTGAAACAGGTAAGAGAGAGAAGAAACA
AAAGGAAAGAGTTGTAGTGAGTTGTCTATGAGTTTTATCTTATCTTGAAC
AGTTGCATCTTATCTTCTACAGTCCAGCTAGAACTAATTGTTGAACATAT
GCTTTTGTTTTTGTTATTTTTTTCTTTTTTATATATTATGATACATAAGG
AAAGCCTATGGGTTTACATATGGAAAGATTCTCGTAATGTTGTATGATAA
CAGATGAGCAACTTAACCAAGGAAGAGTTTGTACATGTACTTCGCCGACA
AAGCACCGGTTTCCCCAGAGGAAGCTCCAAATATAGAGGAGTTACTTTGC
ACAAATGTGGAAGATGGGAAGCTCGAATGGGCCAATTTTTAGGCAAAAAG
TACGTTTATTTGGGCTTGTTCGATACTGAGGTCGAAGCTGCAAGGGCATA
TGATAGAGCTGCAGTTAAGTGTAATGGCAAAGATGCTGTTACTAATTTTG
ATCCCAGCTTATATCAAGATGAGCTTAAAGCCTCTGAATCTTCAGGTCAT
GGTGTAGACCATAATCTAGATTTGAGTTTGGGCAGTTCAGCTTCTAATCA
GCAAAGCAGTGCGGACTTTGCTAATAGAAATGCATATACTG
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