CX295150

Overview
NameCX295150
Unique NameCX295150
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length681
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 359.762 bits (922), Expect = 7.753e-99
Identity = 174/226 (76.99%), Postives = 196/226 (86.73%), Query Frame = 3
Query:    3 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAK 680
            GRALYHDLN YR+LFD D NPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRV PESV+YSFGTLLLDLLSGKHIPPSHALDLIR +N  MLMDS LEG FS+DDGTEL+RLASRCLQYEPRERPN KSLV+++ PLQK+ E+ S+ L+G+P+   +T     L+PLGEAC R DLTAIHEI+EK+GYKDDEG   ELSFQMWTDQ+Q+TL  KK+GD+AFR K
Sbjct:  175 GRALYHDLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTT----ALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHK 396          
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: Y4523_ARATH (Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.116e-88
Identity = 160/228 (70.18%), Postives = 189/228 (82.89%), Query Frame = 3
Query:    3 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGI--PHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAFRAK 680
            GR LYHDLN YR+LFD+DG+PRLSCFGLMKNSRDGKSYSTNLA+TPPEYLR GRV PESV YSFGT+LLDLLSGKHIPPSHALD+IRGKN ++LMDS LEG FS ++ T +V LAS+CLQYEPRERPN K LVA+L PLQ +++VPSY ++GI       ST Q   L+PLGEACSR+DLTAIH+IL    Y+DDEG  NELSFQ WT Q+++ L+++KRGD +FR K
Sbjct:  192 GRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTPQR-PLSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQSFREK 417          
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.634e-49
Identity = 100/223 (44.84%), Postives = 142/223 (63.68%), Query Frame = 3
Query:    3 GRALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQTITLTPLGEACSRLDLTAIHEILEKVGYKDDEGIANELSFQMWTDQIQETLNSKKRGDAAF 671
            G A Y++L+ Y++LFD+DG+  LSCFGLMK   +             + + TG V PE+V+Y FGT+L++LLSGK IPPSHA ++I  KN   LMD  L+G FS D+   + +LAS+CL+YE +E PN K +VA+L  LQ   E PSY ++ + +       +  L+PLGEAC R+DL +IH IL   GY DD+ I  ELSF+ W  +++E  + ++ GD AF
Sbjct:  166 GFASYNNLSAYKVLFDEDGDACLSCFGLMKEINN-------------DQITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIHSILVLAGYDDDKDII-ELSFEEWIQEVKELQDVRRNGDRAF 374          
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16
Identity = 61/195 (31.28%), Postives = 97/195 (49.74%), Query Frame = 3
Query:    6 RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-SY-STNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLI--------RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYT-------LMGIPHGTA-STKQTITLTPLG 512
            + +Y D+    IL D D N +LS FGL ++   G  SY ST +     +  PEY+ +G +   S VYSFG LLL++LSGK    H  P+   +L+          +  L+++D+ L+  +  ++   +  +A +CL +EP+ RP    +V +L  LQ     PS T        +G   GT  S+++  T  P G
Sbjct:  197 KVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQLQDNLGKPSQTNPVKDTKKLGFKTGTTKSSEKRFTQKPFG 391          
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15
Identity = 50/164 (30.49%), Postives = 81/164 (49.39%), Query Frame = 3
Query:    6 RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGK-SYSTN-----LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGK----HIPPSHALDLI--------RGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPS 443
            + +Y D+    IL D D N +LS FGL ++   G+ SY +        +  PEY+ TG +   S VYSFG +LL+LL G+    H  P+   +L+          +  L+++D+ L   +  +    L  +A +CL +EP+ RP    +V +L  LQ     P+
Sbjct:  192 KVIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALVQLQDSVVKPA 355          
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15
Identity = 56/155 (36.13%), Postives = 85/155 (54.84%), Query Frame = 3
Query:   12 LYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSY-STNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-----KHIPPSH------ALDLIRGKNFLM-LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 422
            +Y D  T  IL D + N +LS FGL K+   G KS+ ST +     +  PEYL TG +  +S VYS+G +LL++LSG     K+ PP        A  L+  K  L  ++D+ L+  +S ++  ++  LA RCL +E + RPN   +V+ L  +Q
Sbjct:  201 IYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHIQ 355          
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 3
Query:    6 RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDG-KSY-STNL----AFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHI----PPSHALDLIR-GKNFLM-------LMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQ 422
            R +Y D  T  IL D + N +LS FGL K+   G KS+ ST +     +  PEYL TG +  +S VYSFG +LL+LLSG+       PS   +L+   K +L+       ++D+ L+  +S ++  ++  L+ RCL  E + RPN   +V+ L  +Q
Sbjct:  198 RVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQ 354          
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13
Identity = 51/194 (26.29%), Postives = 88/194 (45.36%), Query Frame = 3
Query:   12 LYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD------------LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPS-----YTLMGIPHGTASTKQTITLTPLGEACS 524
            ++ DL    IL D D NP+++ FG+ +N R  ++ +T         + PPEY+  G+   +S VYSFG L+L+++ GK     H +D            L   ++FL L+D  +   +  D+    + ++  C+Q  P +RP   ++   LT       VP      + +   P+  A   +    T +  ACS
Sbjct:  457 IHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTMSTVFQMLTNTFLTLPVPQLPGFVFRVRSEPNPLAERLEPGPSTTMSFACS 650          
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13
Identity = 49/180 (27.22%), Postives = 86/180 (47.78%), Query Frame = 3
Query:    6 RALYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLA------FTPPEYLRTGRVIPESVVYSFGTLLLDLLSG-------KHIPPSHALDLIR-----GKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVPSYTLMGIPHGTASTKQT 491
            + +Y D  +  +L D    P+LS FGL +   DG +     A      +  PEY++TG +  +S VYSFG +L ++++G       K +     LD ++      + F M++D  L  ++       L +LA  CL+   +ERP  + +V  L  + +E++   Y     P  T +TK++
Sbjct:  213 KVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLKKIIEESDSEDY-----PMATTTTKES 387          
BLAST of CX295150 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13
Identity = 44/161 (27.33%), Postives = 76/161 (47.20%), Query Frame = 3
Query:   12 LYHDLNTYRILFDQDGNPRLSCFGLMKNSRDGKSYSTN------LAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALD------------LIRGKNFLMLMDSCLEGHFSNDDGTELVRLASRCLQYEPRERPNAKSLVASLTPLQKEAEVP 440
            ++ D+    IL D D NP+++ FG+ +N RD ++  +         + PPEY+  G+   +S VYSFG L+L+++SG+     + +D            L    + L L+D  + G +  D+ T  + +   C+Q  P  RP   ++   LT       VP
Sbjct:  471 IHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGRKNSSFYQMDGSVCNLVTYVWRLWNTDSSLELVDPAISGSYEKDEVTRCIHIGLLCVQENPVNRPALSTIFQMLTNSSITLNVP 631          
The following BLAST results are available for this feature:
BLAST of CX295150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
Y5126_ARATH7.753e-9976.99Probable serine/threonine-protein kinase At5g41260... [more]
Y4523_ARATH2.116e-8870.18Probable serine/threonine-protein kinase At4g35230... [more]
SSP_ARATH5.634e-4944.84Probable inactive receptor-like kinase SSP OS=Arab... [more]
BIK1_ARATH6.287e-1631.28Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y3545_ARATH9.079e-1530.49Probable receptor-like protein kinase At3g55450 OS... [more]
APK1B_ARATH9.079e-1536.13Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK1A_ARATH3.450e-1435.67Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
CRK16_ARATH1.311e-1326.29Putative cysteine-rich receptor-like protein kinas... [more]
Y5707_ARATH2.921e-1327.22Probable receptor-like protein kinase At5g47070 OS... [more]
CRK30_ARATH4.982e-1327.33Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionC05069B03SK PhIFruit1 Citrus clementina cDNA clone C05069B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295150 ID=CX295150; Name=CX295150; organism=Citrus clementina; type=EST; length=681bp
AAGGGAGGGCATTATATCATGACCTTAATACTTATAGGATTTTATTTGAT
CAGGATGGTAATCCCAGGCTCTCCTGCTTTGGCCTTATGAAGAATAGTAG
AGATGGCAAGAGCTATAGTACAAACTTGGCTTTCACTCCCCCGGAATACT
TGAGAACAGGAAGGGTTATCCCAGAAAGTGTTGTTTACAGCTTTGGCACC
CTGTTGCTTGATCTTCTCAGTGGCAAACACATACCCCCAAGTCATGCTCT
TGACCTCATACGTGGGAAAAATTTTCTGATGTTGATGGACTCATGTTTGG
AGGGTCATTTCTCAAATGATGATGGAACTGAACTAGTTCGGTTAGCTTCA
CGATGTTTACAGTATGAACCCCGTGAAAGGCCAAATGCAAAGTCTCTTGT
AGCTTCTCTCACTCCTCTTCAGAAGGAAGCTGAGGTTCCATCGTACACTT
TGATGGGTATTCCGCATGGAACTGCATCCACCAAGCAAACGATTACACTT
ACTCCTCTGGGTGAAGCTTGTTCAAGACTTGACCTTACTGCAATTCATGA
AATATTGGAGAAGGTTGGATACAAGGATGATGAGGGAATTGCAAATGAGC
TTTCTTTCCAAATGTGGACAGATCAAATACAGGAGACATTGAATTCCAAG
AAGCGTGGAGATGCTGCTTTTCGAGCTAAAG
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