CX295294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: BH096_ARATH (Transcription factor bHLH96 OS=Arabidopsis thaliana GN=BHLH96 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.560e-48 Identity = 110/211 (52.13%), Postives = 132/211 (62.56%), Query Frame = 3 Query: 63 NFNEFYSEDXXXXXXXXXSSILDADHPLHQMDITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSL------------GARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLT 659 N+NE ED S +D + D+ R KRRR +S KN+EEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP Y QRGDQASI+GGAIN++KELE LQS+ + K S S S F++FFAFPQY S +A+IEV MVESHA+LKI +K+RP+QLLKLVS +QS+RLT Sbjct: 70 NYNE---EDLQWPRDLPYGSAVDTESQPPPSDVAAGGGRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRP--------TSAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLT 269
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: BH094_ARATH (Transcription factor bHLH94 OS=Arabidopsis thaliana GN=BHLH94 PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 6.140e-46 Identity = 100/171 (58.48%), Postives = 127/171 (74.27%), Query Frame = 3 Query: 168 PNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARK----EIKENSESGSTL---FAEFFAFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLT 659 P +R KRRR ++ KN+EEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+VKELE LQS+ ++ + K + S S+L F +FF+FPQY E+ +S A+IEV + ESHAN+KI +K++P+QLLKL++ LQS+RLT Sbjct: 92 PQHRRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVP------ESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLT 256
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: BH099_ARATH (Transcription factor bHLH99 OS=Arabidopsis thaliana GN=BHLH99 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33 Identity = 76/166 (45.78%), Postives = 112/166 (67.47%), Query Frame = 3 Query: 183 KRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNS------IADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLTS 662 ++RR +S K + ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q DQASII G I+++K+LEQRLQSL A+ + + ++S +F++FF FPQY A S+ + + +AD+EV MVE HAN+K+ +K +P+ L K+++ S+ L++ Sbjct: 84 RKRRRRSEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSLEAQLKATKLNQS-PNIFSDFFMFPQYSTATATATATASSSSSSHHHHKRLEVVADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLST 248
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: FAMA_ARATH (Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.676e-33 Identity = 81/184 (44.02%), Postives = 113/184 (61.41%), Query Frame = 3 Query: 156 DITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSN----------------ETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLT 659 ++T + KR+RA++ K EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SYVQRGDQASIIGGAI FV+ELEQ LQ L ++K + E+G + + I++ E ++ +AD+EV ++ A +KI S+RRP QL+K ++ L+ + L+ Sbjct: 170 NVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLS 353
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: BH070_ARATH (Transcription factor bHLH70 OS=Arabidopsis thaliana GN=BHLH70 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.564e-33 Identity = 80/166 (48.19%), Postives = 109/166 (65.66%), Query Frame = 3 Query: 165 LPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSN-ETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLT 659 + + KRRR K KN EEIE+QRMTHIAVERNRR+QMN +L+ LRS++P SY+QRGDQASI+GGAI+FVK LEQ+LQSL A+K +++ ++ + P+ SN E Q+S IE ++ESH NLKI+ R+ QLL+ + L+ +R T Sbjct: 169 MTREKRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRSQQSDDNKEQI-------PEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFT 327
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: BH071_ARATH (Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32 Identity = 88/212 (41.51%), Postives = 116/212 (54.72%), Query Frame = 3 Query: 120 SILDADHPLHQMDITLPNNRPKRRRAKSR--KNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKE-------------------IKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVESHANLKIRSKRR-----------PKQLLKLVSGLQSMRLT 659 S + P Q N KRRR K R KN+EE ENQRMTHIAVERNRR+QMN++LSVLRSLMP + +GDQASI+GGAI+F+KELE +L SL A+K +EN S+L F Y ++ + + D+EV ++E+HAN++I S+RR P QL KLV+ LQS+ L+ Sbjct: 47 SEISNQEPPPQRQPPATNRGKKRRRRKPRVCKNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQENRNG---STSSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLS 255
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: BH057_ARATH (Transcription factor bHLH57 OS=Arabidopsis thaliana GN=BHLH57 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.124e-31 Identity = 74/175 (42.29%), Postives = 111/175 (63.43%), Query Frame = 3 Query: 159 ITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSI---------ADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRL 656 +T+ R KR+R ++ KN++E+ENQRMTHIAVERNRR+QMNE+L+ LRSLMP S++QRGDQASI+GGAI+F+KELEQ LQSL A K E+ T + + +S ++N ++E ++++H +LK+R KR +Q+LK + ++ ++L Sbjct: 90 VTVKEKR-KRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEKRKDGTDETPKTA-----SCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKL 258
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: BH067_ARATH (Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.468e-31 Identity = 76/177 (42.94%), Postives = 109/177 (61.58%), Query Frame = 3 Query: 147 HQMDITLPNNRPKRRRAKSRKNQEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEIKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSN------ETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSMRLT 659 H + + + KRR+ K KN EEIENQR+ HIAVERNRR+QMNE+++ LR+L+P SY+QRGDQASI+GGAIN+VK LEQ +QSL ++K ++ S S A I SN E Q I IE ++++H +LK++ +++ QLLK + L+ ++LT Sbjct: 148 HLLPQEMTREKRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKRTQQQSNSEVVENA-------------LNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLT 311
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: SPCH_ARATH (Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 3 Query: 171 NNRPKRR--RAKSRKNQEEIEN---------------QRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKEIKENSE 437 N+ PKR+ R ++RK ++E E Q+M+H+ VERNRRKQMNE+L+VLRSLMP YV+RGDQASIIGG + ++ EL+Q LQSL A+K+ K +E Sbjct: 63 NSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAE 168
BLAST of CX295294 vs. ExPASy Swiss-Prot
Match: MUTE_ARATH (Transcription factor MUTE OS=Arabidopsis thaliana GN=MUTE PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 56/153 (36.60%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 237 MTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQRLQSLGARKE---------------IKENSESGSTLFAEFFAFPQYXXXXXXXXXXAIMSNETQNSIADIEVNMVESHANLKIRSKRRPKQLLKLVSGLQSM 650 M+HIAVERNRR+QMNE+L LRSL P Y++RGDQASIIGG I F+KEL+Q +Q L ++K I+ +S +T F A ++ A++E + S+ L++ S+R QL+K++S L+ + Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPH----ANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKL 149 The following BLAST results are available for this feature:
BLAST of CX295294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295294 ID=CX295294; Name=CX295294; organism=Citrus clementina; type=EST; length=698bpback to top |