CX295346

Overview
NameCX295346
Unique NameCX295346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig637 contig Ccv1_Contig637:1..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.685e-15
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 178
            LL  EYNAKLSDFGLAK GP GDK+HVSTR++GTYGYAAPEY+ TG
Sbjct:  211 LLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATG 256          
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.209e-15
Identity = 37/46 (80.43%), Postives = 42/46 (91.30%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 178
            LL  E+N+KLSDFGLAKAGP GDKTHVST+V+GT+GYAAPEYV TG
Sbjct:  223 LLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATG 268          
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.400e-14
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 178
            LL  ++NAKLSDFGLAKAGP GD THVST+V+GT+GYAAPEYV TG
Sbjct:  226 LLDADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATG 271          
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.829e-14
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGE 181
            LL ++Y  KLSDFGLAK GP GDKTHVSTRV+GTYGY AP+Y MTG+
Sbjct:  237 LLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQ 283          
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.829e-14
Identity = 37/46 (80.43%), Postives = 41/46 (89.13%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 178
            LL  EYNAKLSDFGLAK GP GDK+HVSTRV+GT+GYAAPEY+ TG
Sbjct:  210 LLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATG 255          
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.548e-13
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGE 181
            LL + ++ KLSDFGLAK GP GDK+HVSTRV+GTYGY APEY MTG+
Sbjct:  220 LLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQ 266          
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.883e-13
Identity = 34/46 (73.91%), Postives = 38/46 (82.61%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 178
            LL   YNAKLSDFGLA+ GP GD +HVSTRV+GT GYAAPEY+ TG
Sbjct:  210 LLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATG 255          
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.003e-12
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGETF 187
            LL   Y+AKLSDFGLAK GP  +K+HV+TR++GTYGYAAPEY+ TG  +
Sbjct:  225 LLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLY 273          
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.311e-12
Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 178
            LL  +YNAKLSDFGLA+ GP GD ++VSTRV+GTYGYAAPEY+ +G
Sbjct:  209 LLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSG 254          
BLAST of CX295346 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 32/46 (69.57%), Postives = 41/46 (89.13%), Query Frame = 2
Query:   41 LLQQEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 178
            LL  ++NAKLSDFGLA+ GP G++++VSTRV+GT+GYAAPEYV TG
Sbjct:  204 LLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTG 249          
The following BLAST results are available for this feature:
BLAST of CX295346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
APK1B_ARATH3.685e-1580.43Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK2B_ARATH8.209e-1580.43Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
APK2A_ARATH1.400e-1478.26Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
RLCK7_ARATH1.829e-1474.47Probable serine/threonine-protein kinase RLCKVII O... [more]
APK1A_ARATH1.829e-1480.43Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
PBS1_ARATH1.548e-1372.34Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
NAK_ARATH5.883e-1373.91Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CX32_ARATH1.003e-1265.31Probable serine/threonine-protein kinase Cx32, chl... [more]
BIK1_ARATH1.311e-1271.74Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y3545_ARATH1.712e-1269.57Probable receptor-like protein kinase At3g55450 OS... [more]

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Properties
Property NameValue
Genbank descriptionC05071C04SK PhIFruit1 Citrus clementina cDNA clone C05071C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295346 ID=CX295346; Name=CX295346; organism=Citrus clementina; type=EST; length=745bp
ACGAGGTCTGTCCTCAGTTTAATGAGTTCTTAGTATGGAATTACTTCAAC
AGGAATATAATGCCAAGCTTTCAGATTTTGGTCTTGCAAAAGCAGGCCCT
CAAGGGGACAAAACACATGTTTCTACTAGGGTTGTAGGAACATATGGCTA
TGCGGCTCCAGAGTATGTTATGACAGGTGAGACATTTCAGGAGGCGTTTG
AACAAAATGAACCATAGACTCTGGCTTGGCACTAGACCTTTTAGAGGATT
TGGAGTCACCATTAAAAATGGTTTGAATCTCTACACACCAATGTAGAAGG
AATTATGTGTGCAAATTCATGCAAATAGGCATTTTGTTAAAAAGTTTCTC
TATCAGCTGGGCAAGAATATTGTTCTTGCGCGAGTTGTGTGGCACGTAAC
ATTCACGGAGACACACTGAACACAAATTTTTCTTTAATTGAAGTACACCT
CTTTTCTCACCATATTTTGTACATGTATTGTACATATTCAACATGTTGAT
CTAATGAGTATAATGTTATTTGGCATTCACTATCCAACTCTTCGTGCACC
AAACCTGACATATAGTATTTGAGTTCAGATGCTTTAGGTCTTTGTCTAGA
AGCAAGTGGTTTACTGGAGTTTTCTGTATCACTGGAAATTTGGGGACCTA
AGAATATCAAACTATGCCCTTTTCTTTTCCAGGACACCTGACGTCTAAGA
GTGATGTTTACAGCTTTGGCGTAGTGCTGCTTGAGATTTTGACAG
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